FMO01028.5prime Sequence
1114 bp (142 high quality bases) assembled on 2008-02-20
> FMO01028.5prime
CAGTCGACATGACTAGCTGCGTGCCAGCGCATCAGCAAAAGGACCAGGAG
CAGTTGCTAAAGGAACTGGCCAGCAGTGGCGACGAGATGGACGACCCGGA
CGATCCGGACCAGGGAACACCACCAGCTGGTAGAGCCGACCTTTCTCTTT
TTCGAATAGTAACACCTGCTGGGTGTGCAACGGCTACTATGGGGCCCAAC
TTCGGGGAAGCCGTTGGGGCGGGGCCTGGCACCCCTTCCTGGACCACGCC
CAACGGGGCGGAGGAACTGGTCACGGAGCTTTCCGAATGACGAAGGATTC
GGGGAACGACAAACCCCCCGTTCAGGGCCAACCAGGAAAAACAAGGAAAC
CCAAAACCAACTAAAATTCTGGGGTTTTGAGGATTGGAAGGAACCCCCAC
CCGGGGCCCGGGCCAAAAACCCAAATCCCCCCCCCCCATGGGACCCCCGG
ATCACCCCCCCCCCCCCCCGTTTTAAAACTTGCCCACCCCGGGCCCAAAG
TTCGGCCCCCAACCAGGTTCCCGAGGGGGATTTTTCACCAAAAAAACCTT
TTTCCCTTCCGGGGGCCCTTAAAGGCCCCGGGGCCCGGGCCCCTTGGGTT
TCCCCCTTAATATTTAAAAATGGCCAAAAAAAGGGCCAAAGGTTTAAAAA
AAACCCCCCCCGGAAAGGAAAAATGGGGCCCCCAAAAATTTTTCAAAAAA
CCCCCCGGGGGGGGGAAAAATTTTCCTTTTTGAAAAAATCCTCGGGGGGG
TATAAAATTTTACAAGGGCCCCATTTTGGGAAAAAACCCCCCAAAGGGGA
GGGGTTTTACAGGTTGTGCCTTTCAAATTTGGAAAACACCTTTTTTGCGT
TGACGCCATGTTTCTGTGCTTCGCTTTGATAAAAAGGGGGGCGGGCAGAT
CCAGAAGAATCCAGTGGGCATCGGAGCGGCATGATGCACACTTTGGCGGG
GAGCATTGTGAAGCACATCTGAGCATCGCAACGTGATGGAACATATGAGG
GAAATCGGGCACGCATCTCAGGGAGTTTCTGTCATACTCGACGATCGAGA
CCGCCAGAGTTCTCAATCGTCAGTTCGATGGCGATCATTCAGCATGTCTG
CTAGCAGGCTTGGA
FMO01028.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:01:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| morgue-RA | 1749 | CG15437-RA | 74..483 | 9..428 | 1205 | 87.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:01:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4444464..4444607 | 154..9 | 630 | 98.6 | Minus |
| 2L | 23513712 | 2L | 4444252..4444402 | 310..154 | 320 | 89.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:01:32 has no hits.
FMO01028.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2010-07-30 09:24:28 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:22:32 Download gff for
FMO01028.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| morgue-RA | 67..380 | 1..324 | 91 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:49:07 Download gff for
FMO01028.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| morgue-RA | 67..380 | 1..324 | 91 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:49:07 Download gff for
FMO01028.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4444464..4444614 | 1..154 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:22:32 Download gff for
FMO01028.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4444464..4444614 | 1..154 | 96 | | Minus |
