FMO01041.5prime Sequence
773 bp (773 high quality bases) assembled on 2008-03-07
> FMO01041.5prime
ATAAAAAAAAGTTATCAGTCGACATGTTTCTCACGCGTTCCGAGTACGAC
AGAGGCGTGAACACCTTCTCGCCGGAGGGCCGCCTCTTCCAAGTGGAATA
TGCCATTGAGGCCATCAAATTGGGCTCCACAGCAATTGGAATTTGCACGC
CAGAAGGAGTGGTTTTGGCGGTGGAGAAGCGCATCACTTCGCCGCTAATG
GTACCCAGTACTGTGGAGAAGATTGTGGAGGTGGACAAGCACATTGGTTG
CGCCACCTCCGGCTTGATGGCCGATGCCAGGACTCTGATCGAGAGGGCAC
GCGTGGAGTGCCAGAACCACTGGTTCGTCTACAACGAGCGCATGTCCATC
GAGTCCTGCGCCCAGGCTGTGTCCACTTTGGCCATCCAGTTCGGTGATAG
TGGCGACAGCGATGGTGCCGCCGCCATGAGTCGTCCCTTTGGTGTGGCCA
TTCTATTTGCCGGCATCGAGGCGGGACAACCCCAGTTGTGGCACATGGAT
CCCTCCGGCACATTCGTGCGCCACGGAGCCAAGGCCATTGGCTCGGGCAG
CGAAGGTGCTCAGCAGAATCTGCAGGACTTATTTAGACCCGATTTGACTC
TCGATGAGGCTATCGACATTTCGCTCAACACACTTAAACAGGTTATGGAG
GAGAAACTAAACTCCACCAATGTGGAGGTGATGACCATGACGAAAGAAAG
AGAGTTCTACATGTTCACCAAGGAGGAGGTGGAGCAGCACATTAAGAACA
TTGCGGCAAGCTTTCTAGACCAT
FMO01041.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:42:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prosalpha5-RB | 873 | CG10938-RB | 72..804 | 23..755 | 3665 | 100 | Plus |
| Prosalpha5-RA | 884 | CG10938-RA | 83..815 | 23..755 | 3665 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:42:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17413100..17413700 | 155..755 | 3005 | 100 | Plus |
| 2R | 25286936 | 2R | 17412910..17413044 | 23..157 | 675 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:42:26 has no hits.
FMO01041.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:42:51 Download gff for
FMO01041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10938-RB | 58..809 | 8..761 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:27 Download gff for
FMO01041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosalpha5-RA | 80..820 | 16..761 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:34 Download gff for
FMO01041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosalpha5-RA | 80..820 | 16..761 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:34 Download gff for
FMO01041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17412903..17413043 | 17..156 | 97 | -> | Plus |
| 2R | 17413102..17413705 | 157..761 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:27 Download gff for
FMO01041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13300408..13300548 | 17..156 | 97 | -> | Plus |
| arm_2R | 13300607..13301210 | 157..761 | 99 | | Plus |
