FMO01048.5prime Sequence
772 bp (735 high quality bases) assembled on 2008-02-20
> FMO01048.5prime
ATTAAACGAAGTTATCAGTCGACATGTCTCGCGGAAGTTCACCCGGCTTT
GACAGACACATCACGATCTTCTCTCCGGAGGGACGCCTCTACCAAGTGGA
GTACGCCTTCAAGGCTATTGCCCAAGAGAACATCACCACGGTGGCGCTGA
AGAGTGGCGACTGTGCCGTGGTGGCCACCCAAAAAAAAGTGACCGACAAG
AACATCGTGCCTGAAACGGTGACCCACCTGTTCCGCATCACCAAGGACAT
TGGATGCGCAATGACCGGACGCATAGCTGATTCCCGCTCACAGGTGCAGA
AGGCCAAATACGAGGCCGCCAACTTCCGCTACAAGTACGGCTACCAAATG
CCCGTGGATGTGCTGTGTCGTCGAATTGCGGATATCAACCAGGTGTACAC
GCAGAATGCCGAGATGCGTCCGCTCGGCTGCAGCATGGTGCTGATCGCTT
ACGACAATGAAATCGGCCCCAGCGTTTACAAGACGGACCCGGCTGGCTAC
TTCAGCGGGTTCAAGGCCTGCAGCGTGGGTGCCAAGACTCTGGAGGCCAA
CAGCTATCTGGAAAGAAGTACAAGCCCAACTTGTCGGAGGAGAAAGCGAT
CCAGCTGGCCCTCTCCTGTCTGTCCAGTGTGCTCCCTATAGACTTCAAGC
CGAACGGCATTGAGATCGGCGTGGTCAGCAAGTCTGATCCCACTTTCCGT
ATTTTGGATGAGCGGGAGATCGAGGAACACCTCACCACGATCGCCGAGAA
GGACGCAAGCTTTCTAGACCAT
FMO01048.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Prosalpha1-RB | 969 | CG18495-RB | 136..868 | 23..754 | 3520 | 98.8 | Plus |
Prosalpha1-RA | 902 | CG18495-RA | 69..801 | 23..754 | 3520 | 98.8 | Plus |
CG30382-RB | 885 | CG30382-RB | 52..784 | 23..754 | 3520 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7827404..7827885 | 754..274 | 2285 | 98.8 | Minus |
2R | 25286936 | 2R | 7830514..7830995 | 754..274 | 2285 | 98.8 | Minus |
2R | 25286936 | 2R | 7828171..7828348 | 276..99 | 860 | 98.9 | Minus |
2R | 25286936 | 2R | 7831281..7831458 | 276..99 | 860 | 98.9 | Minus |
2R | 25286936 | 2R | 7828410..7828486 | 99..23 | 370 | 98.7 | Minus |
2R | 25286936 | 2R | 7831520..7831596 | 99..23 | 370 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:23:47 has no hits.
FMO01048.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:40:12 Download gff for
FMO01048.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18495-RA | 47..792 | 17..765 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:33:10 Download gff for
FMO01048.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30382-RB | 47..792 | 17..765 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:01:34 Download gff for
FMO01048.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30382-RB | 47..792 | 17..765 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:01:34 Download gff for
FMO01048.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7828171..7828347 | 100..276 | 98 | <- | Minus |
2R | 7828410..7828491 | 17..99 | 95 | | Minus |
2R | 7827396..7827882 | 277..765 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:33:10 Download gff for
FMO01048.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3714901..3715387 | 277..765 | 97 | <- | Minus |
arm_2R | 3715676..3715852 | 100..276 | 98 | <- | Minus |
arm_2R | 3715915..3715996 | 17..99 | 95 | | Minus |