FMO01059.5prime Sequence
1217 bp (744 high quality bases) assembled on 2008-03-07
> FMO01059.5prime
AAAAACGAAGTTATCAGTCGACATGCAGCGAGTCCAGGCCGACCAAAAGC
CAGCCAGAATGCACCAGCATGCACATACGCATTCGCACGCGCACAGTTTG
CAGCATGCGGAGGAGAAGGAGCACAATAGCAATGAGATGACGACCAACTT
GTCGTCGACTGGCCGAATTGCGGCCAGTAGCAGTGCCACGCCCAGCGCAG
CAGCGGGAGGCGGGGCCAGCGGAGCACCCACTCCGCCCAAGAGTCTGGCG
CTCAATCAGAACCATCACTATGCACCCGGTTCGGATACATCCGGGGAACA
GGAGGAGGAGCTGCTGGACTCGCGATACGAGTGCGCCATTTGCATCGATT
GGCTAAATGAGCCGGTGTTGACGTCGTGCGGCCATCGATTTTGTCGCAGC
TGCCTCACCGCCTGGATGCAAAAGAACAATCAATGTTTTTTTTTTGGACA
ACAAGCGTCTGTCCGCCGAGCACGACATCTTTCCGGACAACTACACGCGC
CGCGAGATCGAGCAACTCAAGCGAGATTGCCCCAACTCCTCGCTGGGCTG
TTCGGTGGTTGCCTCGCCCATCGAACTGCATCGCCATCTGTCCAGTTGTC
CCTATCGGCGGCAGCAGGAGCCGCAGGAGGAGAAGTGCCCGTTTGCCAAG
ATCAAGTGCGATTTTGTGGGCCGACCAGAGACCAATCAGTTGGAGGAGCA
CCTCAAGGCCGACATGCCGCATCACATGCAGCTGATGCTGCAGGCATTTC
AGCAGACAGCCATTGCCACCTGGCAGCCACACAAGCCCAGCTAAGTGGCG
CCGCCGTGGAGAATGGTCATGGCCAGCACAGCTGCCTCCCCGCCGCAATA
TGCCATGGTGTGGATGACCAGATTGTGCAAACGATGTACCATAGATTGTG
GTTTGGAACACGCACTGCCTACAGGAAACCCAACTGGAAATAGGCAAAGC
ATTGCGTCTGCACGCCAGCAGCCCCGTTGATCCGCGCTCTCCATGGACGA
TGGGTGCGCATCAACACTGGGCGCTTGGTGCTCGCCTGCCGTCATGCCAA
CATCATGTTACTCCACCAATGCTCACTCTCCCCCATGCTACTAGTCTCGG
TAGTGGTGTGAACTTCAGCCCGGTACCCGATGGTTCCACTTGTCATGTCA
TCTGGGCAATCGGAAACTTACCTTGTGATGTCTCCTCAGGATTCATACAG
AGGTGCGTATGTGAGCA
FMO01059.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:16:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Traf6-RA | 2788 | CG10961-RA | 126..1179 | 23..1052 | 4200 | 94.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:16:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8156386..8157261 | 895..23 | 3940 | 97.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:16:07 has no hits.
FMO01059.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:42:55 Download gff for
FMO01059.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10961-RA | 98..977 | 15..891 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:41:43 Download gff for
FMO01059.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Traf6-RA | 118..997 | 15..891 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:03:38 Download gff for
FMO01059.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Traf6-RA | 118..997 | 15..891 | 97 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:03:38 Download gff for
FMO01059.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8156390..8157269 | 15..891 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:41:43 Download gff for
FMO01059.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8050423..8051302 | 15..891 | 97 | | Minus |
