FMO01064.5prime Sequence
928 bp (928 high quality bases) assembled on 2008-02-20
> FMO01064.5prime
CAGTCGACATGACGCGCGATGAGAAACTGCCACTTAAACAGGCGGAGGTC
TCCATCCAAAGGTTTCAGGATGTGGCGGTGCCCCACCATCTGAGCCTACT
GAAAAACCATCGCAGCAATATAGAAAAAAGCCTGGCGCTCGGCGACTGGC
AAAAAATCAAAAAGGAGGAACTCAATGCTATGAGGGTCATTAAGCAGATC
AAGAATCTACTTCTGGAAATGGATGCACTGCGAGAAAAAGTACGGGAGGA
GGATCTGGAACGTTTCGACGACCTAATGAAACCTGGCAGGGATACTGCCT
TCGCTGGCATGAAGGAATTTGCGGAGCTCCAACTCAAATCACCCACCTCC
ACTTTGAGTTCTCAGTACGACGACGATCTGGACAATCAGCCACAGGAGGT
GGATATGAACAGTCTACCCGCACACCGCCACATGCCCCAGCTGCAACTCA
ATTTCCAGCTGGAGGAACACCAATTGGCGCAGAGGCAAGCCTGCCTGGAT
CAGATGGAGAACCTGCAACAGGAGATCTACGATCTGCACGGGATGTTCCA
GGGAATGCGTCAACTGACTGCAGAGCAATCAGTGGCGGTGGAAAAGATAG
CAGACAATGCGGAGGAAGCTCTGGAGAATGTCCAGCAGGGCGAATTGAAT
CTGCGCCGGGCGCTCACCTACAAGAAGGCCATGTACCCCGTAGTCGGAGC
TCTTCTGGGCACCTGTGTGGGAGGACCCATTGGTCTGGTGGCGGGCATGA
AAGCTGGAGGATTGGCGGCAGTAGGATGTGGCATCCTCGGCTTCACCGGT
GGCTCTGTGCTAAAGGCCAATCCCAATGTAATGCATGGCAACATCGAGGA
GGAGCACGTGAACCGGATAGCGAGTCAACTGAGAGACTGGAGCTAAAAGA
GAAGCCAGAAGCAAGCTTTCTAGACCAT
FMO01064.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:15:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Syx17-RB | 1566 | CG7452-RB | 341..1243 | 9..910 | 4475 | 99.8 | Plus |
| Syx17-RA | 1566 | CG7452-RA | 341..1243 | 9..910 | 4475 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:15:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4404258..4404845 | 324..910 | 2875 | 99.7 | Plus |
| 3L | 28110227 | 3L | 4403950..4404197 | 77..324 | 1240 | 100 | Plus |
| 3L | 28110227 | 3L | 4403827..4403897 | 9..79 | 355 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:15:25 has no hits.
FMO01064.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:40:25 Download gff for
FMO01064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7452-RA | 319..1230 | 1..910 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:41:31 Download gff for
FMO01064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syx17-RA | 332..1243 | 1..910 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:03:24 Download gff for
FMO01064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syx17-RA | 332..1243 | 1..910 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:03:24 Download gff for
FMO01064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4403818..4403895 | 1..77 | 96 | -> | Plus |
| 3L | 4403951..4404197 | 78..324 | 100 | -> | Plus |
| 3L | 4404259..4404845 | 325..910 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:41:31 Download gff for
FMO01064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4403818..4403895 | 1..77 | 96 | -> | Plus |
| arm_3L | 4403951..4404197 | 78..324 | 100 | -> | Plus |
| arm_3L | 4404259..4404845 | 325..910 | 99 | | Plus |
