FMO01091.5prime Sequence
1236 bp (866 high quality bases) assembled on 2008-03-07
> FMO01091.5prime
AAAAACAAAGTTATCAGTCGACATGACGGAGCTGGGCATGGAGTTGGAGA
GCGTTCGCCTGGCGACATTTGGGGAATGGCCCCTGAATGCCCCAGTTTCC
GCGGAGGATCTGGTCGCCAATGGTTTCTTTGCCACGGGAAACTGGCTGGA
GGCCGAGTGCCATTTCTGCCACGTGCGCATCGACCGCTGGGAATACGGCG
ATCAAGTGGCGGAGCGCCATCGCCGCTCCTCGCCCATCTGCTCCATGGTT
CTGGCTCCCAATCACTGCGGCAATGTTCCCAGGAGCCAGGAGAGCGACAA
CGAGGGAAACAGCGTAGTGGACAGCCCGGAGTCCTGCTCTTGTCCCGATC
TCTTGTTGGAGGCCAATCGCTTGGTAACTTTCAAGGACTGGCCGAATCCC
AACATCACGCCGCAGGCTCTGGCAAAGGCAGGTTTTTTTTTTCCTGAACC
GTCTGGATCACGTGAAGTGTGTTTGGTGCAACGGAGTGATTGCCATGTGG
GAGAAGAACGACAATGCCTTTGAAGAGCACAAGCGCTTTTTTCCCCAATG
TCCTCGTGTGCAAATGGGCCCCCTTATAGAGTTTGCCACCGGGAAGAACC
TGGATGAGCTGGGCATCCAGCCCACCACTCTGCCACTGCGTCCCAAGTAC
GCCTGCGTGGACGCCAGATTGAGAACCTTCACCGATTGGCCCATTTCCAA
TATTCAGCCCGCTTCGGCTTTGGCGCAGGCTGGCCTATATTATCAGAAAA
TAGGCGACCAGGTGCGCTGTTTCCACTGCAACATTGGATTGCGCTCCTGG
CAGAAGGAGGACGAGCCGTGATTCGAACACGCCAAGTGGTCGCCAAAGTG
TCAGTTCGTTTTGCTGGTCAAGGGTCCAGCCTATGTAAGCGGAGTGCTCG
CGACACAGCTGCCATCGTCAGTTCCCAGCCAGCAACTGCTCCGGCTTCAA
CGACTCCAGCAGACGTACTGATGATGAAGCTCCGGCCAGGAGGCCTTAGC
TTGGGTATCGATGGAGGAGTTGTGCGCAATGCCATCCAGCGCAGCTTCTT
GAATCTGGCTGCCTTCTCTAGGATGGACGAACTATTGCATTGACTCTTTG
GACGATGCGGGCGCCAGGACTCTGCACTGAAGGTGCGCGGAGCCCCGGGA
CCCAGGCCTCTTTTTTGAACCTGTCAGGCCTCCCACAGAGGCTAGACTCT
GGTCCATATCGGGTGGGCATTCTCCTTCTAGCCAGA
FMO01091.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:26:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Diap2-RB | 1997 | CG8293-RB | 39..1202 | 23..1180 | 4950 | 96.1 | Plus |
| Diap2-RA | 2106 | CG8293-RA | 148..1311 | 23..1180 | 4950 | 96.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:26:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15933095..15933820 | 1114..394 | 2805 | 94.9 | Minus |
| 2R | 25286936 | 2R | 15934199..15934570 | 394..23 | 1845 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:26:38 has no hits.
FMO01091.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:43:17 Download gff for
FMO01091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8293-RB | 39..1172 | 23..1154 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:58 Download gff for
FMO01091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Iap2-RA | 148..1281 | 23..1154 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:04 Download gff for
FMO01091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Diap2-RA | 148..1281 | 23..1154 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:04 Download gff for
FMO01091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15933058..15933819 | 395..1154 | 94 | <- | Minus |
| 2R | 15934199..15934570 | 23..394 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:58 Download gff for
FMO01091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11821704..11822075 | 23..394 | 99 | | Minus |
| arm_2R | 11820563..11821324 | 395..1154 | 94 | <- | Minus |
