Clone FMO01095 Report

Search the DGRC for FMO01095

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:10
Well:95
Vector:pMK33-CFH-BD
Associated Gene/TranscriptSyx18-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO01095.5prime Sequence

766 bp (431 high quality bases) assembled on 2008-03-07

> FMO01095.5prime
AAGGGGCGAAGTTATCAGTCGACATGGACATCACCCAAAGCTTCAAAAAC
AGCGTAATGACGGTGCGCCTGCAGCGCAAGGCCGAGCTGGCCGGAAAGGC
CAAGCCCGCCACAGTGCCGACAAAAACTGGACCAATTGGCCCAAAGGATG
ACTTCGCCAAGCAGGCCAAGGAGGTGTGCAACAAGATCACTTCGCTGCGC
AATGTGCTGATCGAGAACCGCACCGCCTACATGCGCATTGGCCAGCACCT
CAAGTCCGCCGCACACATGACCGACGCGCAGCGGGATCTGATTGATCGCG
AGTCGGAGAAGTTCGTCACCTTTTACACGCAGCACCTGGCCAAGATTCGC
ATCGATTGGAAGAGCGCCAAGCGGAAGCCGCAGGAGCGTCAGCACATCGA
CGCCGTGCTGGACCTGCTGGTCAGCTATTTGCACATTGTGTTTTAGATCT
ATCTGGACCAAAAGAAGTACCGTGTGCAACACGAACTGGAAACCTATAGG
CTGCTCAAGCTGGCGGCGGACAAAAAGAAGATACCAGTGCGTCCGGCGGG
CAGCAACAGTGGCAAGCTGGGCAGGCGCCAGGTCAGCAACGATGACAGCG
AACCCATGAAGTCATCTTCACAAGCAAATGGCTACCACGACGAGTCCGCC
GACAATGACTGGAATAACGACGCCTGGGGCGACTGGGGATGAAGACGAGG
AAGGCGACGAGGTGGACGATCACGATGGCGAGAAGGGCAAGGAACCCAAT
CAGGCCAATCATACCC

FMO01095.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:48:14
Subject Length Description Subject Range Query Range Score Percent Strand
Syx18-RA 1442 CG13626-RA 90..826 24..761 3425 97.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:48:12
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24624737..24625473 761..24 3400 97.7 Minus
Blast to na_te.dros performed on 2014-11-28 19:48:13 has no hits.

FMO01095.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:43:12 Download gff for FMO01095.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13626-RA 108..848 24..766 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:52 Download gff for FMO01095.5prime
Subject Subject Range Query Range Percent Splice Strand
Syx18-RA 90..830 24..766 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:27:38 Download gff for FMO01095.5prime
Subject Subject Range Query Range Percent Splice Strand
Syx18-RA 90..830 24..766 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:27:38 Download gff for FMO01095.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 24624733..24625473 24..766 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:52 Download gff for FMO01095.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20450455..20451195 24..766 97   Minus