FMO01096.5prime Sequence
1299 bp (317 high quality bases) assembled on 2008-03-07
> FMO01096.5prime
AAAGGAAAAACTTATCAGTCGACATGGCTGGAGCTGCCTTGGATTGGTCT
CAAGTACGCCGGCACTGAGAATCTGGTGGCCTTTGCCACGCTGCGGTCAG
TGATAAAGGATTTCCTTCGCTTCCCCAGCAGGCCGATGGGCGAATGTGCC
GGTCGTACCACTGTGGAGAGCTGCCTGATGGTGCTGCTCATCTCGATCTC
GTTGGTGTTCGCCGGCTCCGGCAACTGCGAAATTCTTCGCATAATTCGGT
TTCTCAGGTCGCGAGTGGGACCACAATATCCGCACATAACCTACGGCTCT
CACATGGCCATACACATGTCGCTTGGCCTGCTATTCCTCGTTTTCGGGTC
GCTTCACCATTTCCCAGACTCTGGAGTCGATTGCTGCACTGGTCTGCGCC
TTCTTCCCCAAGTTTCCCATACACAGCAACGTTTTTTTATACCATCTGCA
AGCGCTGAGACATCTCTATGTACTGGCTGTGGAACCGCGCCAGTTCCTTC
CCCGGGACATTGACACCAATAAACTGTGCCCTGGCCAACATATCCATGTT
GGAGGTGGTTGCCACCGAGCTGCGCCGCCTGCCCATCGCTCCCTGCATCC
TGCCAGTGCTGAGCACCCAGCTGCAGGTGGGTGGTGGACAATGAAAACTA
TTGGCCAGTGTGCTTCGAGCGATCGCGCAACTGGTATCAGCTTGGAAAAG
GCGCTGGAAAAGACGTGCACCGATTTGATATATAAAAACGAAATGGTTTG
CCTTTTCCCACTTGGAGGACCCGGACAGGCTGAATAGCATGCTGCCCAAA
CATGGAACGAGGGATACGAAGCATCGTTGGTAAATCGAAATTTAACTAAC
CTGCATAATTTGGCCATCTAAACGGATGTGTGAACGATTTCTTCACTCCC
GGCTGGAACACTCAAAGGCAAGAATTTGAGTCACCGGGAGCTGATGAACG
GGAACGAGGTGGATGCTGCTATTTAATAAGGCCGGGGCCAAAGGGACCCC
ATGGCTATTTTCTGGCTCGTCTTACCTAAAACGTTAAACAAACCCCGAAA
CCCAGTTCCCTTGTCCCAAACTAATATCCCAATGGGTGGGGCCTGAAAGA
AAGCCTCACCTCAATAGCCCTAATTTGACCTCCAAACACGGGAATACTCA
AGAATTCCCCGCCTCAATTTTCTCCGTGGGTCACTTTATATCACGATAAT
GATGAGATAGTTAAGAGAATGATACTCTCTCTCTCACTCAGGGGGAGAGA
AAAAGAGAGAGTCGCGCGTGACACTCTCGCGCGACACACAGCCCTGGGA
FMO01096.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:01:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| shtd-RA | 6481 | CG9198-RA | 4723..5661 | 23..973 | 3265 | 91 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:01:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15457016..15457425 | 431..23 | 1820 | 97.3 | Minus |
| X | 23542271 | X | 15456596..15456944 | 794..439 | 1135 | 91.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:01:44 has no hits.
FMO01096.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2010-07-30 09:24:31 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-04 23:22:37 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 20:49:13 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:49:13 Download gff for
FMO01096.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15457018..15457437 | 11..429 | 95 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:22:37 Download gff for
FMO01096.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15351051..15351470 | 11..429 | 95 | -> | Minus |
