FMO01104.5prime Sequence
1202 bp (750 high quality bases) assembled on 2008-03-04
> FMO01104.5prime
CAGTCCACATGGCCGATGTGGACGATTTTGATTCTCTGTCCAATGCTGAG
TTGCGCGCCAAGATGCTGGCACAGGGGCTGCCCAACATCCCCGTGACGGA
TAGCAGCCGGAAGGTTCTAGTAAAGCGTCTGCGCGCCTCCATTGGTGGCC
AGGCGTCGCCGGCCGCTAGTCCCAAGAAGACCAACAGGCGGGAGACCCTG
GCTCCCGCACCTGGTGCACCATCTGCTCCGGCGGCAGCCTCCACGCCGGT
GGACAAGCTGGATGGCAACAAGGTGGCGCCCGCCACAAAGGCTCGGCGCA
CAATTACCGCTGCAGAGGCCAAGGAACCAGTGCGTCGATTACCCGAGGAA
GCTATACGTCGAGGCCCCGACGAAGCTGACCGCCTACGATCCGAGGAGCC
CGTTGCCGCCAGGAAGCCAATAACTGCTCCTGCTGCTCAACCCGTACAGA
CCCGGCGCACTTCCACCTCCTCGGGGTCTGAAAGGAAAGTAGTGGAGCCC
TTGAGGAAGCCAGAAATCATTGTTGAGCAACCGGCTTCCTCGAAGCGCGC
TGATCGAGAGGAGAATTATCTTAAGGTCAACTCCCTGATTGTCCTAGAGT
CCGATGAAGAAGAGGACGAGCAGCTAGTCCAGGCTGCAGATCTGGTGGAG
CAGGAGCACGCGGCCAGACAGAAGACCACGAAGCTCGCAAGCAGCGGCAC
CACTACGTACGAGTACAAAAGCAAGGTTGTGGAGCCTCCACGCCGACAGG
TCTATGAAGCGACAGCAGCTCTCGTGCTGCCGCCATCTGTGCCATCTGCC
AGAGCGCAGACCACCAGTTTCACCAGGTCCTATGACTATGCGAGCAACTC
AGCACTCGGTCGCTATAGCAGTTTTGTGCGTACTGCAGCCCAAGGCTATG
TGACTGCAGAGGCTTCGCCGGTGGCCTACTACTCATCAGCTACAAGTCGT
ACTATGCTAACGAGCTGAGCGACGATCCTGATTCAAGGAAGACCAGTACG
AATAGCCCATTGGCAGGAATCTAGCTCGGTTGCGAGCCGAACGAATGGAG
AATCCATCAGTGGAATTCAGACGACATTGGGCAGGAAAACGCGGGGAGCG
GTTCTCGCATGAGCCAGGGCAGGGGCTCTTGGCGAAGTAAACCGAATCCG
AGCCTTACGTTGGTGGAACGCCTGAACAAAAATATCCACTCACAGTCACA
TC
FMO01104.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:27:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ote-RA | 1571 | CG5581-RA | 99..1203 | 9..1106 | 4840 | 96.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:27:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18276043..18277079 | 1043..9 | 4695 | 97.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:27:31 has no hits.
FMO01104.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:40:39 Download gff for
FMO01104.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5581-RA | 109..1232 | 1..1115 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:33:23 Download gff for
FMO01104.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ote-RA | 93..1216 | 1..1115 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:23:22 Download gff for
FMO01104.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ote-RA | 93..1216 | 1..1115 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:23:22 Download gff for
FMO01104.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18275962..18277085 | 1..1115 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:33:23 Download gff for
FMO01104.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14163467..14164590 | 1..1115 | 96 | | Minus |