FMO01105.5prime Sequence
1157 bp (332 high quality bases) assembled on 2008-03-04
> FMO01105.5prime
CAATCCACATGCCCGTGCTGCCGATGCCACCACTCATGCACAACGCCGTG
GAGCCGATGCAAGGGGACATCGCGCCGCCGAACGAGGACAACCAAAACAA
CTATGACCAGCAGATTGTGGTGGAGAACCCCAGCATCGATCTCGAAGTGT
ACGCCAACCAATATGCCGGGATCGTGCGGCTCCATCGCCTAATTTATGTG
GCGGACGTCTGCCCGGTTTTAGCCGTGGAGGCTCTGAAAATGGCCATTAC
TTACGTTCAAACCACCTACAACGTAAATCTCTACCAAGTGCTGCACAACC
GCTTGAGTGATCTAAACGCTGGAAATGCCCCTGCGCCACCAGCAAATGCT
GGCGGAAATCAGGGAGGAGCAGCGGCTCCCGGTCCCCTGGCAGCTGCTCC
CCTTCCGGATATCGCGGAACAACTTGTGGCTCAGGCTCAAGGACAGGCTC
AACCCGCTGTCGAAAAGGATGCCTTCGCCTACGATGCCGCTTGGGTAGAC
ACCAAGATGAAATAGGCGGCTCTTAAGCTGGAGAAACTGGACTCAGACCT
CAAGAACTACAAGTCCAATTCGATCAAGGAGAGCATCCGGAGGGGCCACG
ATGACCTGGCTGACCACTACCTCAGATGTGGCGACCTCACCAATGCGCTG
AAGTGCTACTCTCGGGCCAGAGACTACTGCACTAGTGGCAAGCATGTGGT
AAACATGTGCCTTAACGTGATCAAGGTGTCATTTATCTCCAGAATTGGGC
CCATGTGATGAGCTACATATCCAAGGCGGAAAGCACTCCGGACTTCGCCG
AGGGCTCCAAGGAGGCTAATGCGCATGTTCATACTCTCCTTGAATGCGCT
GCTGGTCTGGCGGACTGCAGCAAAGAATATACGTGCCGCTAAGCGTTTCT
CATGCTACTCGATCACTGCACTTACCAAATGATCTCCACAGCATGTGACG
TCTATGGTTGCTCTGCACCTGCACTTTGATCGACAGAGCTTAGCGACGTC
TCCCTCTCATCTTTAATGGTCTTAAGACTGGAGCCCAACCAGAATATTCA
GTTCAGAGTATCCCTCTGTGACCTCGATAGAATAGAACTGCTGTGACTTA
TTGCCTGAACCTCGTACGGATCATCCGCCATTCACTTAGCTATGGCGTAT
GCCAACT
FMO01105.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:20:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CSN1b-RA | 1802 | CG3889-RA | 137..1142 | 9..992 | 4095 | 95.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:20:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18903855..18904689 | 874..42 | 3775 | 97.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:20:44 has no hits.
FMO01105.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:40:41 Download gff for
FMO01105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3889-RA | 217..1236 | 2..1001 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:35 Download gff for
FMO01105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CSN1b-RA | 130..1149 | 2..1001 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:55:24 Download gff for
FMO01105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CSN1b-RA | 130..1149 | 2..1001 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:55:24 Download gff for
FMO01105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18903710..18904689 | 42..1001 | 94 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:35 Download gff for
FMO01105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18896810..18897789 | 42..1001 | 94 | <- | Minus |
