FMO01111.5prime Sequence
821 bp (787 high quality bases) assembled on 2008-03-04
> FMO01111.5prime
TTTAATACGAAGTTATCAGTCGACATGCCTAACGACACTGTGGTAAAGGT
GCAGGAGTACAAGGACTCGTTGATCCTCAAGGCAGAGCTGCTAATCACCA
AGGGGTTCCCGGAGAATATCGTCCGGCTGAACGAGCTGCTGGCCACGCCG
ATCTTCAACGAGCGCAACTTCGAAGAAGTGCACCAGGACCTCAACATCCC
GGTCCTGCCGCCTCTCCTGGTTAAAAACGAGTTGGAGGATCGTGACAGTC
TGCCCACCAAGCGCCAGCGCGTGGATGTCATCGTCTCTGGGCAGCCTGTC
ATGGGTCTGCCCGCCGGTACAGTGCCGTGCAACAAGCCGCTCTGCGAGAT
GATCAAGGTCGTCAAGCCTATCATTAGTAGGGGGTGTGGAGGATTCCAAT
CTACTTAAGATGTGGATCTCCTTTATGATACCCAAGATCGAGGATGGCAA
CAACTTTGGCGTCTCCATTCAAGAGGACACGCTTGCCGAAATTCAAACTG
TGGAATCCGAGGCGGCCGCCTTATTTGACCAGATATCGCGCTATTTCTTG
TCGCGCGCCAAGGTGGTGTCCAAGGTGGCCAAGTATCCGCACATCGATGA
TTATCGGCGCGCAGTCGTCGAACTTGACGAGAAGGAGTACCTCAGCTTGT
GGCTGGTCGTTTGTGAGGTCCGCAATCGCTACTCCTCGCTGCACGACATT
GTTATTAAGAATCTCGAGAAGCTAAAGAAGCCGCGCTCCTCAAATACCGA
AAGCCTGTATGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGGCCCAG
GTAGGTGGTCATAATCATAAT
FMO01111.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:24:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
REG-RB | 1830 | CG1591-RB | 204..942 | 21..760 | 3555 | 98.8 | Plus |
REG-RA | 1370 | CG1591-RA | 177..915 | 21..760 | 3555 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:24:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 13213156..13213520 | 396..760 | 1795 | 99.5 | Plus |
X | 23542271 | X | 13212585..13212938 | 21..374 | 1755 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:24:22 has no hits.
FMO01111.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:40:36 Download gff for
FMO01111.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1591-RA | 182..926 | 21..767 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:36 Download gff for
FMO01111.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
REG-RA | 177..921 | 21..767 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:58:11 Download gff for
FMO01111.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
REG-RA | 177..921 | 21..767 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:58:11 Download gff for
FMO01111.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13212585..13212958 | 21..395 | 98 | -> | Plus |
X | 13213156..13213528 | 396..765 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:36 Download gff for
FMO01111.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 13106618..13106991 | 21..395 | 98 | -> | Plus |
arm_X | 13107189..13107561 | 396..765 | 98 | -> | Plus |