FMO01115.5prime Sequence
851 bp (851 high quality bases) assembled on 2008-03-04
> FMO01115.5prime
CAGTCGACATGTCGGAAATGCAGATGGACTGTGCTTTGGATCTGATGCGG
AGGCTGCCGCCCCAGCAGATCGAGAAGAACCTTATTGATCTGATAGACTT
GGCACCGGATCTCTGCGAGGACTTGCTCTCCTCCGTGGACCAGCCGCTGA
AGATCGCCAAGGACAAGGAGCACGGCAAGGACTATCTGCTGTGCGACTAT
AACCGGGATGGGGACTCCTACAGATCGCCCTGGTCGAACTCCTACTATCC
GCCGCTGGAGGATGGCCAAATGCCCTCGGAACGACTGCGCAAACTGGAAA
TCGAGGCGAACTATGCCTTCGATCAGTACAGGGAGATGTACTACGAGGGA
GGCGTCTCTTCCGTCTACCTATGGGATCTGGATCACGGGTTTGCCGCCGT
TATACTGATCAAAAAGGCGGGAGATGGCAGCAAGATGATCCGCGGCTGCT
GGGACTCCATCCATGTGGTCGAGGTACAGGAGAAGACCACCGGCAGGACG
GCCCACTACAAGCTCACCTCCACGGCAATGCTCTGGCTGCAGACCAACAA
ACAGGGTTCGGGAACCATGAATCTGGGCGGATCCCTCACCCGGCAGCAGG
AGCAGGACGCCAACGTCAGCGAGTCGTCGCCGCACATCGCCAACATTGGC
AAGATGGTCGAGGAGATGGAGAACAAGATCAGGAACACCCTGAACGAGAT
CTACTTTGGCAAGACCAAGGACATCGTGAACGGACTAAGGAGCACACATC
ACTGGCCGATCAGCGCCAGCAGGCGGCCATGAAGCAGGACCTCGCAGCGG
CCATCCTGCGACGCATGTCAAGCCCGAATCGAACGCAAGCTTTCTAGACA
T
FMO01115.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:14:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
cpb-RB | 1713 | CG17158-RB | 148..975 | 9..834 | 4060 | 99.5 | Plus |
cpb-RA | 1591 | CG17158-RA | 211..1038 | 9..834 | 4060 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:14:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 1705399..1706224 | 11..834 | 4000 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:14:32 has no hits.
FMO01115.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:40:46 Download gff for
FMO01115.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17158-RA | 209..1036 | 9..834 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:46:31 Download gff for
FMO01115.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
cpb-RA | 211..1038 | 9..834 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:03:00 Download gff for
FMO01115.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
cpb-RA | 211..1038 | 9..834 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:03:00 Download gff for
FMO01115.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 1705392..1706224 | 1..834 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:46:31 Download gff for
FMO01115.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 1705392..1706224 | 1..834 | 98 | | Plus |