Clone FMO01115 Report

Search the DGRC for FMO01115

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:11
Well:15
Vector:pMK33-CFH-BD
Associated Gene/Transcriptcpb-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO01115.5prime Sequence

851 bp (851 high quality bases) assembled on 2008-03-04

> FMO01115.5prime
CAGTCGACATGTCGGAAATGCAGATGGACTGTGCTTTGGATCTGATGCGG
AGGCTGCCGCCCCAGCAGATCGAGAAGAACCTTATTGATCTGATAGACTT
GGCACCGGATCTCTGCGAGGACTTGCTCTCCTCCGTGGACCAGCCGCTGA
AGATCGCCAAGGACAAGGAGCACGGCAAGGACTATCTGCTGTGCGACTAT
AACCGGGATGGGGACTCCTACAGATCGCCCTGGTCGAACTCCTACTATCC
GCCGCTGGAGGATGGCCAAATGCCCTCGGAACGACTGCGCAAACTGGAAA
TCGAGGCGAACTATGCCTTCGATCAGTACAGGGAGATGTACTACGAGGGA
GGCGTCTCTTCCGTCTACCTATGGGATCTGGATCACGGGTTTGCCGCCGT
TATACTGATCAAAAAGGCGGGAGATGGCAGCAAGATGATCCGCGGCTGCT
GGGACTCCATCCATGTGGTCGAGGTACAGGAGAAGACCACCGGCAGGACG
GCCCACTACAAGCTCACCTCCACGGCAATGCTCTGGCTGCAGACCAACAA
ACAGGGTTCGGGAACCATGAATCTGGGCGGATCCCTCACCCGGCAGCAGG
AGCAGGACGCCAACGTCAGCGAGTCGTCGCCGCACATCGCCAACATTGGC
AAGATGGTCGAGGAGATGGAGAACAAGATCAGGAACACCCTGAACGAGAT
CTACTTTGGCAAGACCAAGGACATCGTGAACGGACTAAGGAGCACACATC
ACTGGCCGATCAGCGCCAGCAGGCGGCCATGAAGCAGGACCTCGCAGCGG
CCATCCTGCGACGCATGTCAAGCCCGAATCGAACGCAAGCTTTCTAGACA
T

FMO01115.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:14:33
Subject Length Description Subject Range Query Range Score Percent Strand
cpb-RB 1713 CG17158-RB 148..975 9..834 4060 99.5 Plus
cpb-RA 1591 CG17158-RA 211..1038 9..834 4060 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:14:31
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 1705399..1706224 11..834 4000 99.5 Plus
Blast to na_te.dros performed on 2014-11-28 22:14:32 has no hits.

FMO01115.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:40:46 Download gff for FMO01115.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17158-RA 209..1036 9..834 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:46:31 Download gff for FMO01115.5prime
Subject Subject Range Query Range Percent Splice Strand
cpb-RA 211..1038 9..834 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:03:00 Download gff for FMO01115.5prime
Subject Subject Range Query Range Percent Splice Strand
cpb-RA 211..1038 9..834 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:03:00 Download gff for FMO01115.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 1705392..1706224 1..834 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:46:31 Download gff for FMO01115.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 1705392..1706224 1..834 98   Plus