FMO01118.5prime Sequence
1107 bp (848 high quality bases) assembled on 2008-03-04
> FMO01118.5prime
ATTATACGAAGTTATCAGTCGACATGGAGAGTCCTGTAGAGCAACAAGAG
GACACAGCCAAGCCAGACGAAGATCTGCCCAACGAGCAGGTTACACAGTT
CCTTCGCCAACTGGTCAGTTAGGTGTGGCCAGAGCTGGGCGCCAATCCGG
AACTGCGTCTGGAAAGGGCGAGTGCCAAGGGCGACAACTATTTGGGCGTG
GTGTGGCGCCTACAGGCGGCATCCGATTCGAAACGCAGCCTGGTGGTTAA
ACTGCCGCCACAGAATCGCGTGCGCCGCAAGCAATTCTTTGCACGACCAT
GTTTCCTGCGCGAGACGGCAGCATATGAGGTCTTTCTGCCGCTGACTGCG
TTAATTCAGGATAAGTGGAAGATAATCGGAGATGATCGTTTCCGGCAGCA
CGCGCTCCCCCCCCCCAACTCGCCAGGATGAGCCCAACGAGTGGGGCGGG
CTGGAGGATCTGTCTTGTGCCGGCTTCTCACTGCACAATCGCTTTCTCGA
CCTATCCGTCGAGCATGTGCGTCGCGTAATGCTCACCTATGCCAAATTAC
ATGCTATATCATTGGCCGGGAAACGGCAGTTGCCCGAGAAAATGCAACAA
CTGCAGCAGCTGGTGGATATCTTTGAGCAGCGACGCGATGATCATGCCTT
GGGGGTCTACTTCGAGAATCTGAAGGAAAGCGCCCTATCCGCACTGCTCG
CACCGGCGGATGATGCATACAGAGTTCGTCTGGAGGCGTACTTCGCCAGA
GGATCGTACTTTGAGCTGCTGCTGCCTTTGGTCAGCGGATTCAATTGCGA
ACCCTTCGCTGTTATTTGCCACGGCGAGTGCTGGAATAACAACATTCTCT
CCAGAGTACAGAGCGGGGCGAGCTCGAGGACGTGCGCCTGATCGACTGGC
AACTGATGCATATGCTCCGCCGGCCACCGATCTTACTTAATTCCTCTTCC
TTGCACTTCGCGGCGATTCCGGAGCGACACTTCGAAAATAGCTCCAGGAT
ACTATGAGAGTTGGGCTGCACTGATAAACTAGCGACGGGAGGAACACTTT
TCCCGTCTGGCCTCATGAACGGGGGTACAAACAGGTGGGGCTGCTTTCTC
TGATTGG
FMO01118.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1561-RB | 2160 | CG1561-RB | 631..1670 | 24..1051 | 4450 | 96.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11582576..11583545 | 990..24 | 4260 | 97.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:24:44 has no hits.
FMO01118.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:41:47 Download gff for
FMO01118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1561-RB | 608..1642 | 16..1039 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:33:27 Download gff for
FMO01118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1561-RB | 623..1657 | 16..1039 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:08 Download gff for
FMO01118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1561-RB | 623..1657 | 16..1039 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:08 Download gff for
FMO01118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11582595..11583549 | 16..972 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:33:27 Download gff for
FMO01118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11476628..11477582 | 16..972 | 96 | | Minus |
