FMO01119.5prime Sequence
1252 bp (824 high quality bases) assembled on 2008-03-04
> FMO01119.5prime
ATAATACGAAGTTATCAGTCGACATGGGCTTTGACGAGAAGCGTGAGCCC
ACCGGCGGCAGACTGCGACTGCAGGACATTCCGGCCCTCACCCAGGACCA
CTGCCGCATGCGGGATCCGGCGGAGGTGGAGCGCATCATCAACGAGTTCG
TCATCGGCGGACCAGAGCGCATGCAAATCGTCTCCGACTTCGACTACACC
ATCACCAAGCAGCGCACGGAGGATGGAGGAGCAGTGCCCTCCAGTTTCGG
GATCTTCAACGCCTGCCAGTCGCTGCCGGAAAACTTTAAGGCGGAGACGG
ACAAGCTGTACCACAAGTACCGGCCCATTGAGATCGATCCCCACATGCCC
ATCGCCGAGAAGGTGCAGTACATGATCGAGTGGTGGACCAAGTCTGGCGA
ACTGACCAGCGGCTTCCCCTTCGACCAGTCGGAAATAGATCAGATAGCCA
GCAAGTACACGCATGCGCTACGTGACCGCACCCACGAGTTCTTTGCGGAC
CTCCAGCGCTTGGGCATTCCCACGCTTGTCTTCTCCGCCGGGCTGGGCAA
CTCGGTGGTCTCGGTTCTTCGCCAGGCCAACGTTTTGCATCCGAACGTGA
AGGTAGTCTCGAACTTTCTTCAGTTCCGGGATGGCCTTCTAGATGGCTTT
CAGCAGCCGATGATACACACCTTCAACAAGAACGAAACGGTGCTAAATGA
GACCAGCGAGTATTACGACTTGGTGCACACCAGGGACCACATCATAGTCA
TGGGCGACTCAATTGGTGATGCAGACATGGCCTTCGGGGGTGCCTGCCTC
CTCACACATCATTGAAAATCGGCTTCCTTCTTCGACCACGTAGAAACCCA
ACATGAAGAAGTACATGGACACCTTTGACATAGTGCTCGTCGATGACCAA
GACCATGGACGTGCCCAGGAACCCTGCTCCTCCTTCATCGAGAAGCAACA
CAGGCTGAACCTGGAAGCCCCAAGCAGAGCTTCCTTACCAGCTTATCTAG
ACCATCGTTTGGCGCGCGGGCTCAGTAAGTGGTCTTATCCTTATCATAAT
TCTAATCTATTTCCCACTAGGCTGGGAGATTCTGGTCATGATTAGGGCCT
GATTCTCTTCACAATAAACGCTCGTGCACCCGAGCTTTTCTGACAATTCC
TAGTGGATTCTCTGAGTCTTTACTTGTACTTATCACGGAGTCCAGGGGAA
TCCGAATTATCCAAATTTAGACCGTCGCTCTTGTGTCATCTTACTATGCT
AG
FMO01119.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:27:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cN-IIIB-RA | 1530 | CG3362-RA | 375..1330 | 24..985 | 4525 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:27:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24195872..24196827 | 24..985 | 4325 | 98.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:27:52 has no hits.
FMO01119.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:40:50 Download gff for
FMO01119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3362-RA | 326..1286 | 19..985 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:33:37 Download gff for
FMO01119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3362-RA | 370..1330 | 19..985 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:23:33 Download gff for
FMO01119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cN-IIIB-RA | 370..1330 | 19..985 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:23:33 Download gff for
FMO01119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24195867..24196827 | 19..985 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:33:37 Download gff for
FMO01119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20083390..20084350 | 19..985 | 98 | == | Plus |
