FMO01120.5prime Sequence
887 bp (792 high quality bases) assembled on 2008-03-04
> FMO01120.5prime
CAGTCGACATGGCGCAAACGCAAGCTCCAGCCGCCAAGCGCATGAAGCTG
GAGAAGACGCCGGCAAATCCCGTCGAAGAGGATGAGACGCCCTCCGTGTT
CAATTCGAAGTACAGGGTGTGTCCCTACTTGGACACCATCAACCGTAACC
TGCTGGATTTCGATTTCGAGAAGCTTTGCTCCATTTCGCTGACGAGGATC
AATGTTTATGCCTGCCTGGTGTGCGGCAAGTACTTCCAGGGACGTGGCAC
CAACACCCACGCCTACACACATTCCGTGGGCGAGGCTCATCACGTGTTCC
TCAATCTGCACACGCTGCGATTCTACTGCCTGCCGGATAATTACGAGATC
ATCGACTCCTCGTTGGACGATATCAAATACGTGCTAAATCCAACGTTCCC
ACGCCAGGAGATCAGCAAGTTGGATGAGGGGGCGGCCGAAGCATTCGCGA
ACCGTGGACGGTGTTCTGTACTTACCCGGCGTCGTGGGTTTGAACAACAT
CAAAGCGAACGACTACTGCAATGTGGTGCTGCATGCACTCTCCCACGTCG
GTCCACTTAGGGACTACTTCCTGCAAAAGCAAAGCTATGCGCATGTCGTG
CGGCCACCTGGAGATTCCGTGTTCACGCTGGTGCAACGTTTCGGCGAGCT
AATGCGCAAGATGTGGAATCCGCGGAACTTTAAGTCGCACGTTTCGCCAC
ACGAGATGCTGCAAGCTGTGGTGCTTTGGTCCAGCAAGCGTTTCCAGATC
ACCGAGCAGGGCGATCCCATTGACTTTCTGCCCTGATCCTCAATACACCT
GCACCGCGCCTCTCTGGGCAACAACATCCGAATTCTTTCTATACTCTACA
GGTTATTTCTGGCGAAATGAAGATCTACTCGCGCCAG
FMO01120.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:41:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7288-RA | 1695 | CG7288-RA | 93..968 | 9..884 | 3975 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:41:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 18858488..18859288 | 84..884 | 3435 | 96.9 | Plus |
X | 23542271 | X | 18858377..18858432 | 29..84 | 280 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:41:24 has no hits.
FMO01120.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:40:51 Download gff for
FMO01120.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7288-RA | 80..958 | 9..887 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:49 Download gff for
FMO01120.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7288-RA | 93..971 | 9..887 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:05 Download gff for
FMO01120.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7288-RA | 93..971 | 9..887 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:05 Download gff for
FMO01120.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 18858295..18858316 | 9..30 | 100 | -> | Plus |
X | 18858379..18858432 | 31..84 | 100 | -> | Plus |
X | 18858489..18859291 | 85..887 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:49 Download gff for
FMO01120.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 18752328..18752349 | 9..30 | 100 | -> | Plus |
arm_X | 18752412..18752465 | 31..84 | 100 | -> | Plus |
arm_X | 18752522..18753324 | 85..887 | 97 | | Plus |