FMO01121.5prime Sequence
647 bp (646 high quality bases) assembled on 2008-03-04
> FMO01121.5prime
ATAAAACGAAGTTATCAGTCGACATGCCCGGAGCCGGCACGTTCAAGTTA
TTCATCGGGAATCTTGACGAGAAGACACAGGCCACCGAGCTGCGTGCACT
GTTCGAGAAGTACGGCCTTTCTCAGGGAGTGCGACGTGGTGAAGAACTAT
GGCTTCGTTCGCATGGAGACGGAGCAGCAGGGTCGCGATGCCATACAGAA
TCTGAACGGTTATACGCTGAACGAGTTCGCCATCAAGGTGGAGGCGGCCA
AGAGCCGGCGGGCGCCCAATACGCCGACCACGAAAATCTTCGTGGGAAAT
CTAACGGACAAGACGCGGGCGCCGGAGGTGCGGGAACTGTTTCATAAATA
CGGCACCGTCGTCGAATGCGATTTTGTGCGCAACTATGGTTTTGTCCATC
TGGACTGTGTCGGTGATGTGCAGGACGCCATTAAGGAGCTGAACGGTCGC
GTTGTCGATGGCCAGCCGCTCAAGGTTCAAGTGTCGACCAGTCGGGTCCG
CCCCCAGCCGGGCATGGGCGATCCGGAGCAGTGCTATCGGTGCGGAAGAT
CCGGGCATTGGTCGAAAGAGTGTCCGCGACTGTACGGCAGTGCCGGAGGC
GGACGCCAGCCGCCATCGCCCCTCAGCGCCGGCGGCTACAGAGATCG
FMO01121.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:24:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lark-RD | 1758 | CG8597-RD | 276..899 | 23..647 | 2905 | 97.8 | Plus |
| lark-RE | 2087 | CG8597-RE | 605..1228 | 23..647 | 2905 | 97.8 | Plus |
| lark-RC | 1784 | CG8597-RC | 302..925 | 23..647 | 2905 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:24:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7340068..7340691 | 23..647 | 2865 | 97.6 | Plus |
Blast to na_te.dros performed 2014-11-28 19:24:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| micropia | 5461 | micropia DMDM11 5461bp | 1271..1332 | 531..590 | 125 | 69.4 | Plus |
FMO01121.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:40:52 Download gff for
FMO01121.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8597-RA | 344..970 | 20..647 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:08 Download gff for
FMO01121.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lark-RC | 299..925 | 20..647 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:18 Download gff for
FMO01121.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lark-RC | 299..925 | 20..647 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:18:18 Download gff for
FMO01121.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7340065..7340691 | 20..647 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:08 Download gff for
FMO01121.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7333165..7333791 | 20..647 | 97 | | Plus |
