FMO01125.5prime Sequence
872 bp (725 high quality bases) assembled on 2008-03-04
> FMO01125.5prime
CAGTCGACATGGACAAAAATCTGATGATGCCGAAGCGTTCGCGCATCGAT
GTCAAGGGCAACTTTGCCAACGGACCGCTGCAAGCACGCCCACTGGTGGC
CCTACTCGATGGACGCGACTGCTCCATCGAGATGCCCATCCTAAAGGATG
TGGCCACGGTGGCCTTTTGCGATGCACAAAGCACCTCCGAAATACACGAG
AAGGTCCTCAACGAGGCAGTGGGAGCTCTGATGTGGCACACCATCATCTT
GACAAAGGAGGATCTTGAGAAGTTCAAAGCTTTACGCATTATCGTGCGCA
TCGGCAGCGGCACAGACAACATTGATGTAAAGGCGGCGGGCGAACTGGGC
ATCGCCGTGTGCGACGTTCCCGGCTACGGAGTCGAGGATGTGCCCCCCCC
CCACGATGTGCCTCATCCTCAACCTCTAGGGGGGGACATACTGGCTAGCG
AACATGGTGCGCGAGGGCAAGAAGTTCACCGGACCCGAACAAGTGCGGGA
GGCTGCGCATGGCTGTGCACGCATCCGCGGCGACACCTTGGGTCTGGTGG
GACTGGGCCGCATTGGTAGCGCCGTGGCCCTGCGGGCTAAGGCGTTCGGC
TTCAACGTCATCTTCTACGATCCCTACCTGCCCGATGGCATCGACAGTCG
CTGGGCCTAACTCGCGTCTACACGCTGCAGGACCTGCTTTTCCAGTCCGA
TTGCGTCTCACTGCATTGCACGCTCACGACCACAACCATCATTTAATCGA
TGAATTCACAATTAAACAGACGCGACCTGGTGCTTTCTGGAGAAACCGCC
ACGCGGAGGTCTGGTCCATGCCAAACCTGGGGTGGCGCTAAACAGAAGGA
TAAAGCTCCCCCCCGAAGCGAC
FMO01125.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:17:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CtBP-RJ | 2612 | CG7583-RJ | 375..1192 | 5..820 | 3665 | 97 | Plus |
CtBP-RI | 2382 | CG7583-RI | 375..1192 | 5..820 | 3665 | 97 | Plus |
CtBP-RH | 2627 | CG7583-RH | 375..1192 | 5..820 | 3665 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:17:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 13019894..13020202 | 202..511 | 1320 | 95.8 | Plus |
3R | 32079331 | 3R | 13020849..13021114 | 506..769 | 1185 | 98.1 | Plus |
3R | 32079331 | 3R | 13019616..13019816 | 5..205 | 990 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:17:45 has no hits.
FMO01125.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:41:50 Download gff for
FMO01125.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7583-RD | 359..1179 | 1..820 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:39 Download gff for
FMO01125.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CtBP-RH | 372..1192 | 1..820 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:01:06 Download gff for
FMO01125.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CtBP-RH | 372..1192 | 1..820 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:01:06 Download gff for
FMO01125.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 13019613..13019814 | 1..203 | 99 | -> | Plus |
3R | 13019896..13020201 | 204..510 | 95 | -> | Plus |
3R | 13020854..13021114 | 511..769 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:46:39 Download gff for
FMO01125.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 8845335..8845536 | 1..203 | 99 | -> | Plus |
arm_3R | 8845618..8845923 | 204..510 | 95 | -> | Plus |
arm_3R | 8846576..8846836 | 511..769 | 98 | -> | Plus |