FMO01134.5prime Sequence
1230 bp (792 high quality bases) assembled on 2008-03-04
> FMO01134.5prime
CAGTCGACATGCAGGTCTGCGAGGAGGCACTCAAGGTCTTGAGGCAATCC
CGTCGTCGTCCTGTCCGCGGATTACTTCATGTCAGCGGAGACGGCCTGCG
AGTGGTGGACGACGAGACCAAGGGCCTGATAGTGGACCAGACCATCGAGA
AGGTCAGCTTCTGTGCACCGGATCGCAATCACGAACGCGGCTTCAGCTAC
ATATGCCGGGATGGAACCACTCGTCGCTGGATGTGTCACGGCTTCCTGGC
GTGCAAGGACTCCGGCGAGCGATTGTCCCATGCCGTTGGCTGTGCTTTTG
CCGTTTGTCTGGAGCGAAAGCAGCGACGCGACAAGGAGTGCGGCGTGACA
ATGACCTTCGACACGAAGAACTCGACCTTCACGCGGACCGGATCCTTCCG
TCAGCAGACGTTGACGGAGCGTCTGGCAATGGCCACAGTGGGCACAAATG
AGCGGAGCGTAGATGGGCCGGGATCAGCAATGCCGGGTCCTCCGGCGGCC
ACCGTCAAGCCTTTCAATCCCTTCGCCATCGAACGGCCCCATGCCACGCC
CAACATGCTGGAGCGTCAGAGTTCGTTCCGTTTGAGCACGATTGGCAGTC
AGTCGCCGTTCAAGCGCCAGATGTCACTGCGCATCAACGATCTTCCGTCC
AATGCCGATCGTCAGAGGGCCTTCCTGACCGCCGCCGCTGGCAATCCAAT
GCAGACGCCACTGCGAAGTGTTTCTCCCATTGCCGAGGTCTCGCCGGCTA
AGTCTGCTGGAGCGGATCCGTTGTCAGCTGCCGCTGTAGCCCCCGTTCTG
TGAGCAACTGTGTCAGGAGCTCCAGCCCAGGGTCTCCCGCTCTTGACCCA
GACAGACGCCCTATTAGCCGCCGGGCGAGGATCTAAACTTCAACACATCG
CAGCATTAAATCAAATCATCATGGCCGCCGAAGAAGCAGGTGCAACATGT
ACACTTCATATGCTCCGCGACGGCACAGTGACCGCTCTCAGGTGTCAGCA
CCCACGTCCCACATATCCGAACGCTCCATTTCAGTCGCCCTCGCGATCGG
AGCAAAGACATCGAAACCTCCACGGAACTGCCCAGGCGACAATGGCTGGG
CTATGGGTGGCTCAGTACGTATCTCGGGGACCTGAACGTCCCACTTAATG
GCCAGTTGCCGATCTCAAACGTATGGAACATGTGTGGCGCTACGCACTGT
GATGCCTGTTCCCTCACAATAAAAATCCAC
FMO01134.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| numb-RD | 4395 | CG3779-RD | 1112..2223 | 8..1120 | 4740 | 96.2 | Plus |
| numb-RB | 2956 | CG3779-RB | 734..1845 | 8..1120 | 4740 | 96.2 | Plus |
| numb-RA | 3309 | CG3779-RA | 1087..2198 | 8..1120 | 4740 | 96.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9460937..9461973 | 44..1084 | 4115 | 96 | Plus |
| 2L | 23513712 | 2L | 9460717..9460753 | 8..44 | 185 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:14:38 has no hits.
FMO01134.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2010-07-30 09:24:14 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:32:04 Download gff for
FMO01134.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-RA | 1082..2033 | 1..955 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:54 Download gff for
FMO01134.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-RA | 1082..2033 | 1..955 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:54 Download gff for
FMO01134.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9460938..9461847 | 45..955 | 98 | == | Plus |
| 2L | 9460712..9460753 | 1..44 | 93 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:32:04 Download gff for
FMO01134.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9460712..9460753 | 1..44 | 93 | -> | Plus |
| arm_2L | 9460938..9461847 | 45..955 | 98 | == | Plus |
