Clone FMO01137 Report

Search the DGRC for FMO01137

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:11
Well:37
Vector:pMK33-CFH-BD
Associated Gene/TranscriptTom-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO01137.5prime Sequence

514 bp (514 high quality bases) assembled on 2008-03-04

> FMO01137.5prime
TTATACGAAGTTATCAATCGACATGTCGTTCATCACACGGCATTTTAAGT
TTGACAGCAGCAAGGTGATGGAGCCGAGATCAGATCAGCACACGATGGCC
ATGCGGAGTCTGAGGAAACTGGTAAAACCCCTTCTGCGACTGGAGAAGAA
GAAGCAGCTACTCCGGAAGACTCTGGCCGAGATCCAGAACCAAAATGCAG
TCAACGCCTCGCTGGAGGACATGCGCAAAGATCCGGCGGCCAGTTGCGAT
AACATGGCCAACGAGGAGCTGGAGCAGCGACTGTACACCGATCTCCGCCA
GTGCCCCACCAACGTGGCCATGATCGTGCAGCAGGGTCAGCAACAGAGCA
TCGTGCCCGTCCATCCGGAGCAGACCTTCATCCCGGTCCACTTCGCCCGC
ACCACCAGCGGCACCTTCTTCTGGACCTCAGCCGAGGGAGCTCGCCGGCA
CCACGAACAGCAGTTGCGCCAGCAGTTCGACCGTTGGGTTCAGGCCGCAA
GCTTTCTAGACCAT

FMO01137.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:25:11
Subject Length Description Subject Range Query Range Score Percent Strand
Tom-RA 963 CG5185-RA 84..557 23..496 2235 98.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:25:09
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 14969427..14969900 23..496 2235 98.1 Plus
Blast to na_te.dros performed on 2014-11-28 19:25:10 has no hits.

FMO01137.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:41:06 Download gff for FMO01137.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5185-RA 73..557 14..500 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:19 Download gff for FMO01137.5prime
Subject Subject Range Query Range Percent Splice Strand
Tom-RA 76..560 14..500 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:26 Download gff for FMO01137.5prime
Subject Subject Range Query Range Percent Splice Strand
Tom-RA 76..560 14..500 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:18:26 Download gff for FMO01137.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 14969419..14969903 14..500 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:19 Download gff for FMO01137.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 14962519..14963003 14..500 97   Plus