FMO01138.5prime Sequence
740 bp (740 high quality bases) assembled on 2008-03-04
> FMO01138.5prime
CAGTCGACATGACGTTGCCCGAGTTCTTTGGCTGCACCTTCATCGCCTTC
GGACCGCCCTTCGCCTTGTTCGTCTTCACCATCGCCAATGATCCAGTGCG
GATCATCATTCTGATTGCGGCGGCATTCTTCTGGCTGCTTTCCCTGCTGA
TCTCTTCCCTGTGGTATGCCCTGATTCCGCTGAAGGAGTTCCTGGCATTT
GGCGTGGTCTTCTCGGTGTGCTTCCAGGAAGCCTTCCGGTACATCATCTA
CCGGATACTGCGCAGCACGGAGCAGGGATTGCACGCCGTGGCGGAGGACA
CGCGAGTGACGGACAACAAGCACATCCTGGCCTATGTCTCCGGCTTGGGA
TTCGGCATTATATCCGGGATGTTTGCACTGGTCAATGTGCTGGCTGATAT
GAGTGGTCCCGGCACCATGGGCTTGAAGGGCGGAACTGAGCTATTCTTCG
TCACCTCGGCTGCCCAGGCGTTGTCGATTATCCTGCTGCACACCTTCTGG
AGCGTTATTTTCTTCAACGCATTCGACACAAACAACTATATCCACATAGG
CTATGTGGTTTTCAGCCACCTGTTCGTCTCCCTGATAACTCTGCTCAATG
CCAATGAGCTTTACACGACCACTCTGCTGATAAACTACTTGGTCACCATA
CTTACGGGAGTCCTGGCCTTCCGGGTGGCTGGAGGAACATCTCGCAGTTT
CAGAAAATTCATAACATGCCAGGCAAGCTTTCTAGACCAT
FMO01138.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
aph-1-RB | 990 | CG2855-RB | 83..796 | 9..722 | 3570 | 100 | Plus |
aph-1-RA | 863 | CG2855-RA | 83..796 | 9..722 | 3570 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2766315..2766707 | 9..401 | 1965 | 100 | Plus |
2L | 23513712 | 2L | 2766766..2767087 | 401..722 | 1610 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:14:41 has no hits.
FMO01138.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:41:08 Download gff for
FMO01138.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2855-RA | 73..797 | 1..726 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:32:06 Download gff for
FMO01138.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
aph-1-RA | 75..799 | 1..726 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:55 Download gff for
FMO01138.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
aph-1-RA | 75..799 | 1..726 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:55 Download gff for
FMO01138.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2766307..2766707 | 1..401 | 99 | -> | Plus |
2L | 2766767..2767090 | 402..726 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:32:06 Download gff for
FMO01138.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2766307..2766707 | 1..401 | 99 | -> | Plus |
arm_2L | 2766767..2767090 | 402..726 | 99 | | Plus |