Clone FMO01144 Report

Search the DGRC for FMO01144

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:11
Well:44
Vector:pMK33-CFH-BD
Associated Gene/Transcriptp38b-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO01144.5prime Sequence

1233 bp (990 high quality bases) assembled on 2008-03-04

> FMO01144.5prime
CAGTCGACATGTCGCGCAAAATGGCCAAATTCTACAAGCTGGACATCAAT
CGCACCGAGTGGGAAATCCCGGAAACATACCAGAACCTGCAACCCGTGGG
TCAGGGTGCCTACGGCCAGGTCTGCAAGGCCGTGGTCCGCGGAACCAGCA
CGAAGGTGGCCATCAAGAAGCTTGCCAGGCCCTTCCAGTCGGCGGTCCAT
GCGAAGCGCACCTATCGGGAACTGCGGCTGCTGAAGCACATGGATCACGA
GAACGTTATTGGTCTGCTGGATGTCTTTCATCCAGGACAGCCCGCCGATT
CGCTGGATCAGTTCCAGCAAGTGTACATGGTGACCCACTTGATGGACGCC
GATCTGAACAACATAATACGCACGCAGAAACTGTCTGATGATCATGTCCA
GTTTCTGGTCTACCAAATCCTGCGCGGTCTGAAGTACATCCACAGCGCTG
GGGTCATCCATCGTGATCTAAAGCCATCGAACATTGCGGTAAACGAGGAC
TGTGAGCTTCGCATCCTGGATTTCGGTTTGGCCCGTCCCGCAGAAAGCGA
GATGACCGGATACGTCGCAACGCGATGGTACCGGGCGCCTGAGATCATGC
TCAACTGGATGCACTACAACCAGACGGCGGACATCTGGTCGGTGGGCTGC
ATCATGGCTGAGCTGCTGACTGGGCGCACGCTGTTCCCTGGAACCGATCA
CATCCATCAGCTGAACCTCATCATGGAAGTGCTGGGCACGCCAGCTGATG
AGTTCATGAGCCGCATCTCCTCGGAGAGCGCTAGAAACTATATTCGTTCA
CTGCCGGTGATGCCGCGCCGCAATTTCCGCGACATCTTCCGCGGTGCCAA
TCCGCTGGCCATCGATTTGCTGGAGAAGATGCTGGAACTTGACGCCGACA
GCGCATAACCGCCGAGCAGGCGCTGGCTCATCCGTACATGGAGAGTACCA
CGATCCAACCGATGAGCAGACCGCGCCGCTCTACGACCAGAGCTTCCAGG
AAAACGAGCTGCCGGTGGAAATGGCGGAAATGTTCTTCACGAGGTGACGG
CCTCAGCCACGCCGCCCTCCCTGAGCTCTCTGCTAAGAGCAGGCAGCTTT
CTAAACATTGTTTGGCGCGGCCCGGGATGTCTACATATCTAAACCTAGCA
AATCCACTAGCTAGGATCTGACTTGACATGGCTTGGAATCCCAATAACAG
CCCCGGCACCGGAGCGTCTGCAACTTTGGATGA

FMO01144.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:28:14
Subject Length Description Subject Range Query Range Score Percent Strand
p38b-RA 1821 CG7393-RA 206..1289 5..1078 5020 98.2 Plus
p38a-RC 1474 CG5475-RC 215..925 33..743 1255 78.7 Plus
p38a-RB 1634 CG5475-RB 375..1085 33..743 1255 78.7 Plus
p38a-RC 1474 CG5475-RC 1028..1185 846..1001 215 76.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:28:12
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13780996..13782012 5..1019 4895 99.2 Plus
3R 32079331 3R 24150965..24151675 743..33 1215 78.1 Minus
Blast to na_te.dros performed on 2014-11-28 21:28:12 has no hits.

FMO01144.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:41:54 Download gff for FMO01144.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7393-RA 196..1273 1..1069 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:33:50 Download gff for FMO01144.5prime
Subject Subject Range Query Range Percent Splice Strand
p38b-RA 203..1280 1..1069 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:23:43 Download gff for FMO01144.5prime
Subject Subject Range Query Range Percent Splice Strand
p38b-RA 203..1280 1..1069 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:23:43 Download gff for FMO01144.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 13780993..13782050 1..1053 98 == Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:33:50 Download gff for FMO01144.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13780993..13782050 1..1053 98 == Plus