FMO01147.5prime Sequence
1173 bp (938 high quality bases) assembled on 2008-03-04
> FMO01147.5prime
CAGTCGACATGGACAGCAGGGAGGAGAACGCCGTGTACGATGACATGAAC
CTGTACATCGCACCGCAGAGCTTCATCATCGAGCCGAATGGAGGAGATGA
GTTGCTGGTCATCGGGCGCCACGACAAAGTCACCAGGGTTCAGCCAGCGA
GCGGAGGTCTTGTGGCCAACCTTCGCCCCACCAGGAGGATTTGTGGTGTG
CTGGGAACCATTCACCTACTGAGCTGCGACTACCTTCTGGTGGCGACCCA
CCGCCTCTTCGTGGGCGTGCTCAATGGCGCAGTTGTGTGGAGATTAGCGG
GCTATGACATCATACCTTACATTCCGAATTCCTTCCAGCGCAAGGAGAAC
GAAAACTACTTGGGAGTGCTACGCCAGACACTTGACACCAAGTTCTTTTA
CTTCTCCTACCGCTACGACCTTACCAATTCGCTGCAGCGACAGCGGGAGG
TGGCACAATCGCGGCCTGAAGTATCCGGGTTGCTCCAGCGCGCTGAGCAG
CGATTCGTTTGGAATGGCTATGTGCTGCGGCAGTTCAACTGCGATAAGAT
GGAGAAGTTCCAGCTGCCACTCGTCCTGGGCTTCGTGTCTATCAACCAGG
TGCAGATCAACGGGCAGACATTCTTCTGGAGCATCATCACCAGGCGTTCC
GTGCAGCGGGCGGGCACACGGCTCTTCTGCCGAGGCAGCGACGAGCAGGG
CCATGTTGCGAACTTCGTAGAGACCGAGCAAATAGTGGAGTTCAACGGGC
AGCTGACTGGATTCGTGCAGACACGAGGCAGCATGCCCTTCCACTGGCAC
CAGCTGCCCAATTTGCGCTATAAGCCACGACCCGTTCTGGTGCGGGCAAG
GATCATTTGGCCGCCTGCGGGCTCCACTTAAGAACAGATCCGGCTGTATG
GCAACAATGTGGCTGTGAATCTAGTGATCACAAAGTGCCGAAGGCGAGCT
CGAGGCGACTTATGCCGCTGGTTCGAGAAATGGGAAATCATCAGTGCGAT
ACGAGTCTTTCGACTTCCACAGCGATGCGTAAAATGGGCTGGACGCTGAA
CTACTCATCGATGCCTCGCCCTTAGACAGGAATAGTCCGGGTTATCATGT
CTCAACAGGAATGGTTCTAGCCAACTTGTGTTTCTCAACATGATTCACTG
TTCATAAGAAACAATCTGCAGCC
FMO01147.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:01:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sac1-RB | 2327 | CG9128-RB | 166..1277 | 8..1102 | 4935 | 97.3 | Plus |
| Sac1-RA | 2365 | CG9128-RA | 204..1315 | 8..1102 | 4935 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:01:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1248290..1249315 | 8..1025 | 4695 | 98.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:01:06 has no hits.
FMO01147.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:41:03 Download gff for
FMO01147.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9128-RA | 205..1249 | 8..1042 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:22:26 Download gff for
FMO01147.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sac1-RA | 204..1248 | 8..1042 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:48:52 Download gff for
FMO01147.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sac1-RA | 204..1248 | 8..1042 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:48:52 Download gff for
FMO01147.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1248290..1249315 | 8..1025 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:22:26 Download gff for
FMO01147.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1248290..1249315 | 8..1025 | 98 | == | Plus |
