FMO01149.5prime Sequence
1191 bp (947 high quality bases) assembled on 2008-03-04
> FMO01149.5prime
TTTATACGAAGTTATCAGTCGACATGGGAACCTTGGGCAATCAGTTCATC
CTCTCGCGGGAGCGTCGCCGGTTCGGGAGGCAGTGCCTCTTCACAGACCG
CAACGAGATGATCCTCAGTGTGCAGCCGAGTGGACGGTTGCGCCTCAAGT
ACATACTGCGCAATCCGATCAACGAACGGACCCAGCTGAGCGAACAGTAT
GCAGCATCTTCAGTGTTGACACACAACGTGACCCTGGATTCCCATGGCTT
GAATCACTACGAAGGCGGCTGGAACGTCAAGGAGGTGAACATTATGGACG
AGGAGTCCACAATGCGCTATCGCAAAAAAGTCGAGCGTGATGACTCCTGG
GGCATCGAGGTGAACCAATTGATGCACGCCGCAATGGACATCAGTTCGGC
CAACAATGCTGTCAACATCTACGAGGACTTCTTTGTGGATCTACCGGAGG
ATTTGGGCCGCGGCATCAGCATGAAGATCGCTGCCAGGGGTACCCATGTC
TTTCATGATCTGTGGATCCCATCGCGTAGGCTGATGACGTGCGAATGGCT
AAACAACGATCCCAATCAGTTTCTCCTGTTCTATTCCAATCGAATGAGCC
TGACACCGGACTACACAAAACAGCTAAACACGCTGCCCGATTTTGGCAAC
GATAATCCGCATGCATTCTACATTTGGAACTTGGATGATGCCACCCGACC
GGCTGCCCATTACGATTCTAGGAGAGTCGTACGGGTTGCCAAGGTGTGCC
TGCGGGATGAGAGCTACATGGTGGGTGGACTACAGGAGGGTCAGGTCGGC
TTCTGGCTAACCGAGAACCAGGGTGGTCCCAAGAGCATGTGTCCCTCTGA
GGCGTGTCATCGCGAGGGCACAACGGCCATCTGCTGGGTGCACTCGAAAC
TCAACACTGAGTTTTACTCAGGATCACTGGATGGGTCATCAGTACTGGGA
TACCTGGGATCTTCTTATGCGGTCATGAGTGCTGGACGAACCGGACCCCA
GAACAGTTCAATCGCAGATGCACATGGCGTACTTTTTCTCGAGTCGAGTA
ACAAACAGTGCGCTTCTATATTCTGCACAGATTGGTTACTTGTTGTAGGC
ATTCGCAGCACTCGCAGATACATGCGTGCTGCCTTCACTTGCGTCATGCT
TTATGCTATTCGGTTCTAGGAAGAACATCTTGTGGGGGGGC
FMO01149.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:45:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10859-RB | 1989 | CG10859-RB | 24..1122 | 24..1107 | 4875 | 97.4 | Plus |
| CG10859-RA | 2209 | CG10859-RA | 244..1342 | 24..1107 | 4875 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:45:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13397392..13398421 | 1044..24 | 4610 | 97.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:45:26 has no hits.
FMO01149.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:41:59 Download gff for
FMO01149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10859-RA | 244..1299 | 24..1066 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:44:10 Download gff for
FMO01149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10859-RA | 244..1299 | 24..1066 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:32:06 Download gff for
FMO01149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10859-RA | 244..1299 | 24..1066 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:32:06 Download gff for
FMO01149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13397381..13398421 | 24..1058 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:44:10 Download gff for
FMO01149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13397381..13398421 | 24..1058 | 97 | | Minus |
