FMO01151.5prime Sequence
1219 bp (859 high quality bases) assembled on 2008-03-04
> FMO01151.5prime
CAGTCGACATGACACCTAAGTCGATCCAAGATGACACCTATGTGGAGCAG
TTCATGAAGTACAACCTAAATGTCATGCACCAAATGACTAACTTCACTAC
AATGGTAGCGAAGAGCACGACCAGATCCCGCACGCGGTCTAGTGTTCGGG
CCGGAATAGGCGGCAATAAGCAGTCCATTGACGACCTGATGAACGGGATA
CTTTATGAAACTATTAACTGGGAACCGTACAGCACTGTTGAGGCTCTCGA
AGAGGCGTACGAGCCAAAGCCGTATACCAAGTCCTTTTTAAAGATCACCT
TACGCAAGTCTGACTTCTTCGAAATTCACAGCCAGACGCAGACGACGGTG
GCCAAGGGATCGCCCGAGGGCGACGATGCGGAGCGAGACAACCGAAACTA
CGAGTATCTGACAATAGGGAAAGGCAAAATTCGCCGGCGCTCAGACAATG
ACGCTCAGACAGATACTCTGCTCTTCGCCACTCGGGCAGTCAACACCATC
CTCATAACCAAGGCCACCGTCAGCTCTTACGTTTCCAACTTTGAGATGTA
CGACACGCTGAACAATATCACCAGGGAGTTCGCAACAGCCACTATGAGTT
CGGTAAAGGACCTGACCTCGGCTCTAGCGCAGACGGAGGATGCGGATACC
TTTGAGGACGACGAGGCCGTTGCCGAAAAAGACAAGGTCAGCAGCCAGAT
AGAGCGCCTGTTCCGGAGCCCCGAGTTTCGCAACGCCATCATGTACATGG
GCCGCACGCTCTCGAGCAACACAAACGAGGCGGGGTTACGACGCTTCCGT
AACTTTGACCAGGTGGAACGCTGGGACGCGGAGGCCGAGTACGTCTACTC
GATGAACTTGCTCTTTCGGCTGGTACCGGAGCTCAGCAAAGACGAGCGCC
AGGGCCGTAAGCGACATGATATCTGCCGCAGCATGGTGACATCTTGGCTG
TAGCCTACGGACTGTACTCATTTTTCCTCACAGCACGTACGACCTCGGCA
GCGTTTTCTGGGGAGCATTCATAATCCAGCTAGCCGGAGCGCAGATACTA
CTACGAGTTGCAGTACGGCATAAACTTTTCTCGCAATTCTTGCATCCTGC
TTCGCCATTGCCTGTACGCGGCAGCTAAAGGCGAAAGTGAACATTGACGA
ATACTCGTGCGTCCAATGCGCACTCCCAGAATCTCGCCGGGGTTGCCCTC
CGTCGGGATAATAAATGTG
FMO01151.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:44:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dic61B-RB | 2642 | CG7051-RB | 459..1583 | 9..1125 | 4955 | 96.9 | Plus |
| Dic61B-RA | 2616 | CG7051-RA | 433..1557 | 9..1125 | 4955 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:44:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 150928..151791 | 1056..197 | 3735 | 97.6 | Minus |
| 3L | 28110227 | 3L | 151848..152036 | 197..9 | 945 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:44:48 has no hits.
FMO01151.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:41:14 Download gff for
FMO01151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7051-RA | 424..1508 | 1..1077 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:43:45 Download gff for
FMO01151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dic61B-RA | 424..1508 | 1..1077 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:31:49 Download gff for
FMO01151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dic61B-RA | 424..1508 | 1..1077 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:31:49 Download gff for
FMO01151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 150904..151790 | 198..1077 | 97 | <- | Minus |
| 3L | 151848..152042 | 1..197 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:43:45 Download gff for
FMO01151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 150904..151790 | 198..1077 | 97 | <- | Minus |
| arm_3L | 151848..152042 | 1..197 | 97 | | Minus |
