FMO01157.5prime Sequence
1166 bp (914 high quality bases) assembled on 2008-03-04
> FMO01157.5prime
CAGTCGACATGTCGAAGAACAAGCTGAATCTGGTGCTGCCGCCGGTAAAT
ACGGAGGCAACTGTTGCCGCCGCCACAGTGGCGCCGACGCCGCCATTCAA
AACCCCCTCGGGCACAGACACACACAGTTTGCTGGGGAAGCCCAAGACGA
GCATCGATGCGCTGACAGAGACGCTGGAGGGTCTGGACATGGGCGACACG
GAACGCAAGCGGATCAAGATGTTCCTCAGCCAGAAGGAGAAGATCGGCGA
GCTGTCCGACGAGGATCTGGAGAAGCTGGGCGAGCTCGGATCGGGCAATG
GCGGCGTGGTGATGAAGGTCCGGCACACGCACACACACCTGATCATGGCC
AGGAAACTGATTCATCGGGAGGTGAAGCCGGCGATCAAGAAACAGATCCT
GCGCGAACTGAAAGTCCTGCACGAATGTAATTTCCCGCACATTGTCGGTT
TCTACGGCGCCTTCTACAGCGACGGCGAGATCAGTATCTGCATGGAGTAT
ATGGACGGTGGATCACTTGACCTGATCCTCAAGCGGGCCGGTCGAATACC
AGAGTCCATTCTCGGCAGGATCACGCTGGCGGTGCTCAAGGGCTTGAGCT
ATCTGCGCGACAATCACGCCATCATCCACCGTGACGTGAAGCCGAGCAAT
ATCCTCGTCAATAGCAGCGGCGAGATCAAGATCTGTGATTTCGGCGTCTC
CGGTCAACTGATCGACTCGATGGCCAACTCCTTTGTGGGCACCCGTAGCT
ATATGTCGCCGGAGCGATTGCAGGGCACCCACTACTCCGTGCAGTCGGAC
ATCTGGTCGTTGGGTCTGTCGCTGGTGGAGATGGCCATCGGCATGTACCC
CATCCCGCCGCCAAACACCGCCACCCTGGAGTCGATATTCGCGACATGCG
GAGGAGAGCGGCAGCGACGGACGAGCCCAGGGCAATGCATCTTCGAGCTG
CTGGATTATATTGTAAACGACCGCCGCCAGCTAGAAGCCAAGATCTTCTC
CACGAGTTCAGGACTTCGTGGACTCTGCTGAGAAACGCGACGACGGGCCG
ATTCAGACTGGCTGATCTTCTGGATGCTAGGCGATGAGAGTGAATATCCG
CTGGTGCAAATGGACTGCCCTTAAGCCAGCTATGTCCAGCAGTCGAACTC
AGGGCGGCCCGTAAGT
FMO01157.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:14:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsor1-RA | 1799 | CG15793-RA | 458..1489 | 9..1028 | 4805 | 98.5 | Plus |
Dsor1-RB | 1503 | CG15793-RB | 171..1193 | 9..1028 | 4660 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:14:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9248542..9249181 | 119..758 | 3170 | 99.7 | Plus |
X | 23542271 | X | 9249374..9249650 | 758..1023 | 865 | 94.2 | Plus |
X | 23542271 | X | 9247799..9247908 | 9..118 | 550 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:14:40 has no hits.
FMO01157.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:41:19 Download gff for
FMO01157.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15793-RA | 3..1046 | 7..1036 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:46:33 Download gff for
FMO01157.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dsor1-RA | 451..1499 | 1..1036 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:03:04 Download gff for
FMO01157.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dsor1-RA | 451..1499 | 1..1036 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:03:04 Download gff for
FMO01157.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9247792..9247908 | 1..118 | 96 | -> | Plus |
X | 9248542..9249181 | 119..758 | 99 | -> | Plus |
X | 9249375..9249666 | 759..1036 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:46:33 Download gff for
FMO01157.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 9141825..9141941 | 1..118 | 96 | -> | Plus |
arm_X | 9142575..9143214 | 119..758 | 99 | -> | Plus |
arm_X | 9143408..9143699 | 759..1036 | 94 | | Plus |