Clone FMO01157 Report

Search the DGRC for FMO01157

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:11
Well:57
Vector:pMK33-CFH-BD
Associated Gene/TranscriptDsor1-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO01157.5prime Sequence

1166 bp (914 high quality bases) assembled on 2008-03-04

> FMO01157.5prime
CAGTCGACATGTCGAAGAACAAGCTGAATCTGGTGCTGCCGCCGGTAAAT
ACGGAGGCAACTGTTGCCGCCGCCACAGTGGCGCCGACGCCGCCATTCAA
AACCCCCTCGGGCACAGACACACACAGTTTGCTGGGGAAGCCCAAGACGA
GCATCGATGCGCTGACAGAGACGCTGGAGGGTCTGGACATGGGCGACACG
GAACGCAAGCGGATCAAGATGTTCCTCAGCCAGAAGGAGAAGATCGGCGA
GCTGTCCGACGAGGATCTGGAGAAGCTGGGCGAGCTCGGATCGGGCAATG
GCGGCGTGGTGATGAAGGTCCGGCACACGCACACACACCTGATCATGGCC
AGGAAACTGATTCATCGGGAGGTGAAGCCGGCGATCAAGAAACAGATCCT
GCGCGAACTGAAAGTCCTGCACGAATGTAATTTCCCGCACATTGTCGGTT
TCTACGGCGCCTTCTACAGCGACGGCGAGATCAGTATCTGCATGGAGTAT
ATGGACGGTGGATCACTTGACCTGATCCTCAAGCGGGCCGGTCGAATACC
AGAGTCCATTCTCGGCAGGATCACGCTGGCGGTGCTCAAGGGCTTGAGCT
ATCTGCGCGACAATCACGCCATCATCCACCGTGACGTGAAGCCGAGCAAT
ATCCTCGTCAATAGCAGCGGCGAGATCAAGATCTGTGATTTCGGCGTCTC
CGGTCAACTGATCGACTCGATGGCCAACTCCTTTGTGGGCACCCGTAGCT
ATATGTCGCCGGAGCGATTGCAGGGCACCCACTACTCCGTGCAGTCGGAC
ATCTGGTCGTTGGGTCTGTCGCTGGTGGAGATGGCCATCGGCATGTACCC
CATCCCGCCGCCAAACACCGCCACCCTGGAGTCGATATTCGCGACATGCG
GAGGAGAGCGGCAGCGACGGACGAGCCCAGGGCAATGCATCTTCGAGCTG
CTGGATTATATTGTAAACGACCGCCGCCAGCTAGAAGCCAAGATCTTCTC
CACGAGTTCAGGACTTCGTGGACTCTGCTGAGAAACGCGACGACGGGCCG
ATTCAGACTGGCTGATCTTCTGGATGCTAGGCGATGAGAGTGAATATCCG
CTGGTGCAAATGGACTGCCCTTAAGCCAGCTATGTCCAGCAGTCGAACTC
AGGGCGGCCCGTAAGT

FMO01157.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:14:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dsor1-RA 1799 CG15793-RA 458..1489 9..1028 4805 98.5 Plus
Dsor1-RB 1503 CG15793-RB 171..1193 9..1028 4660 97.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:14:39
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9248542..9249181 119..758 3170 99.7 Plus
X 23542271 X 9249374..9249650 758..1023 865 94.2 Plus
X 23542271 X 9247799..9247908 9..118 550 100 Plus
Blast to na_te.dros performed on 2014-11-28 22:14:40 has no hits.

FMO01157.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:41:19 Download gff for FMO01157.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15793-RA 3..1046 7..1036 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:46:33 Download gff for FMO01157.5prime
Subject Subject Range Query Range Percent Splice Strand
Dsor1-RA 451..1499 1..1036 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:03:04 Download gff for FMO01157.5prime
Subject Subject Range Query Range Percent Splice Strand
Dsor1-RA 451..1499 1..1036 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:03:04 Download gff for FMO01157.5prime
Subject Subject Range Query Range Percent Splice Strand
X 9247792..9247908 1..118 96 -> Plus
X 9248542..9249181 119..758 99 -> Plus
X 9249375..9249666 759..1036 94   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:46:33 Download gff for FMO01157.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 9141825..9141941 1..118 96 -> Plus
arm_X 9142575..9143214 119..758 99 -> Plus
arm_X 9143408..9143699 759..1036 94   Plus