FMO01164.5prime Sequence
1204 bp (975 high quality bases) assembled on 2008-03-04
> FMO01164.5prime
ATAAAACGAAGTTATCAGTCGACATGAATCGGGTTAAAAGAATATCTAAT
TACTTTGACTCTATGCTACCCCTGATCGATAATATTTTGCAAGTAGTGAA
TCAGATCTTCGATGATTACACTTCCTTTGATGGCCAAAAGCTCATGCACT
TATACCACCTCATTTACAAGCAGTGCGCGGCGGAGCGCAATTGGAATAAT
CCAGCCCAGAAGAACGGGAGAAGTCTTTACATTGTGCTATCCGACTGCCT
GATGAAGCGACTAAAAAACATAGCATGGGTAATGGAGAACCAACTCGACG
ACAACAAACCAATTCGACTGATCGCCAAATATTTAGAGCACTGGGTACCC
TATCAAAGGTCATGTGAGAAACTGAACCTAGCTTGCTACCACTTCAACCG
CAACTGGGTGGAACGGGAGCGGCTTAAGGGAGACAAAGAAACTTATCCGA
TATATCGCTTGGCCATGATTAGCTGGAAGGAGCTGGTCTTCGAGCCCAGC
GTCACGATTCTCGCCGCCATTAGGCTGATTTTGAGTCAGATGCCCAGGGA
ATACAATAAATCATTGGAATACCAAGTATACCAGGTGCTCCAATCCATTG
TGGAACTGTACGCCAACGATAAGTACCAAGATGTGTCCTTGCCTTCTAGG
ATAGACAAAATTTTCACTGAGAAGGTGATGGATTTCTACAAGTCAACGAC
GTTGCACGAATTCCAAAAGATCGTCGTATCCAATGACTACAAGGATTTCA
AGCATTTCCTTAGTACGCATGCCTAGCCATGCCAGAAATTGAGAATGGGA
CACAATTTAAGGCAATACTAAAAAGATACCTCGCTGCGAGGCTGCAGGAG
ACGAGGCTGTCAGGCAAGGATTATATCCAAGCCTTCTTGGACTTTGTCGC
GGTCCTTTGCAGCGAGCATTGCGGGACACACAAAATTGGCGGAAGTCGTG
ATGCGTGTGCAAGAAGAATAATAGAAGGGCAGATATGACCCACCGTCTGC
TGTCCATATGCACGACTATGACAAAGCAGGAGTCGAGGAAGCATTATGAT
GACTAAACGATCGTAATGCGTGGATTTTAGCGATGGAATCAATTTTTGAC
TGTATTGAAGACCTCGAATCGCAAATCATGAAACTCCACTGGACGTGACT
ATGGATCATCGGAAAATGCAACTGGACTAGGTATTATGTGCCGTAAGAGG
TACC
FMO01164.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11261-RA | 2215 | CG11261-RA | 117..1202 | 24..1078 | 4690 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 13010640..13011569 | 950..24 | 4500 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:14:47 has no hits.
FMO01164.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:41:23 Download gff for
FMO01164.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11261-RA | 108..1073 | 16..976 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:32:11 Download gff for
FMO01164.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11261-RA | 112..1077 | 16..976 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:59 Download gff for
FMO01164.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11261-RA | 112..1077 | 16..976 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:59 Download gff for
FMO01164.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 13010609..13011574 | 16..976 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:32:11 Download gff for
FMO01164.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 13003709..13004674 | 16..976 | 98 | | Minus |