Clone FMO01164 Report

Search the DGRC for FMO01164

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:11
Well:64
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG11261-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO01164.5prime Sequence

1204 bp (975 high quality bases) assembled on 2008-03-04

> FMO01164.5prime
ATAAAACGAAGTTATCAGTCGACATGAATCGGGTTAAAAGAATATCTAAT
TACTTTGACTCTATGCTACCCCTGATCGATAATATTTTGCAAGTAGTGAA
TCAGATCTTCGATGATTACACTTCCTTTGATGGCCAAAAGCTCATGCACT
TATACCACCTCATTTACAAGCAGTGCGCGGCGGAGCGCAATTGGAATAAT
CCAGCCCAGAAGAACGGGAGAAGTCTTTACATTGTGCTATCCGACTGCCT
GATGAAGCGACTAAAAAACATAGCATGGGTAATGGAGAACCAACTCGACG
ACAACAAACCAATTCGACTGATCGCCAAATATTTAGAGCACTGGGTACCC
TATCAAAGGTCATGTGAGAAACTGAACCTAGCTTGCTACCACTTCAACCG
CAACTGGGTGGAACGGGAGCGGCTTAAGGGAGACAAAGAAACTTATCCGA
TATATCGCTTGGCCATGATTAGCTGGAAGGAGCTGGTCTTCGAGCCCAGC
GTCACGATTCTCGCCGCCATTAGGCTGATTTTGAGTCAGATGCCCAGGGA
ATACAATAAATCATTGGAATACCAAGTATACCAGGTGCTCCAATCCATTG
TGGAACTGTACGCCAACGATAAGTACCAAGATGTGTCCTTGCCTTCTAGG
ATAGACAAAATTTTCACTGAGAAGGTGATGGATTTCTACAAGTCAACGAC
GTTGCACGAATTCCAAAAGATCGTCGTATCCAATGACTACAAGGATTTCA
AGCATTTCCTTAGTACGCATGCCTAGCCATGCCAGAAATTGAGAATGGGA
CACAATTTAAGGCAATACTAAAAAGATACCTCGCTGCGAGGCTGCAGGAG
ACGAGGCTGTCAGGCAAGGATTATATCCAAGCCTTCTTGGACTTTGTCGC
GGTCCTTTGCAGCGAGCATTGCGGGACACACAAAATTGGCGGAAGTCGTG
ATGCGTGTGCAAGAAGAATAATAGAAGGGCAGATATGACCCACCGTCTGC
TGTCCATATGCACGACTATGACAAAGCAGGAGTCGAGGAAGCATTATGAT
GACTAAACGATCGTAATGCGTGGATTTTAGCGATGGAATCAATTTTTGAC
TGTATTGAAGACCTCGAATCGCAAATCATGAAACTCCACTGGACGTGACT
ATGGATCATCGGAAAATGCAACTGGACTAGGTATTATGTGCCGTAAGAGG
TACC

FMO01164.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG11261-RA 2215 CG11261-RA 117..1202 24..1078 4690 97.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:46
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 13010640..13011569 950..24 4500 99.7 Minus
Blast to na_te.dros performed on 2014-11-28 20:14:47 has no hits.

FMO01164.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:41:23 Download gff for FMO01164.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11261-RA 108..1073 16..976 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:32:11 Download gff for FMO01164.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11261-RA 112..1077 16..976 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:59 Download gff for FMO01164.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11261-RA 112..1077 16..976 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:59 Download gff for FMO01164.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 13010609..13011574 16..976 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:32:11 Download gff for FMO01164.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 13003709..13004674 16..976 98   Minus