FMO01175.5prime Sequence
1210 bp (993 high quality bases) assembled on 2008-03-04
> FMO01175.5prime
CAGTCGACATGGCCGACGAAAGTCTGCACACCGTGCCCCTGGAGCACAAC
ATAGACTACCACATCGTGACGCTATTCGAGCGCCTGGAGGCGATGCGTAA
GGACTCGCACGGCGGTGGCCACGGGGTCAACAATCGCCTGTCCAGCACCC
TGCAGGCTCCCAAGCGGAGCATGCAGGCTGAGATTCGCACGCTGGAGTTT
TGGAGATCCATCATCAGCGAGTGTCTGGCCTCCTTCATGTACGTGTTCAT
CGTCTGCGGTGCCGCCGCTGGCGTCGGAGTGGGGGCCAGTGTGTCGTCCG
TGCTTTTGGCCACGGCTCTGGCCTCCGGCCTGGCGATGGCTACACTGACG
CAGTGCTTCTTCCACATCTCGGGCGCCCACATCAATCCCGCCGTAACCCT
GGCTCTATGCGTAGTGCGATCCATATCTCCGATCCGGGCTGCCATGTACA
TAACCGCACAATGTGGCGGAGGAATCGCCGGAGCTGCTCTGCTTTATGGC
GTAACTGTGCCTGGTTACCAGGGGAATCTGCAGGCCGCCATCTCACATAG
CGCTGCTCTGGCCGCCTGGGAAAGATTCGGTGTGGAATTCATCCTCACCT
TTCTGGTGGTTCTGTGCTATTTCGTATCCACGGATCCCATGAAGAAGTTC
ATGGGCAATTCGGCCGCCTCGATTGGATGTGCTTACAGCGCCTGCTGCTT
TGTGTCGATGCCGTACCTGAATCCAGCCCGCTCCCTGGGTCCTTCGTTTG
TGCTTAACAAATGGGACAGCCATTGGGTGTACTGGTTCGGACCACTGGTG
GGCGGCATGGCCTCTGGCCTGGTGTACGAGTACATCTTCAACTCGCGCAA
CCGCAACCTGCGCACACAAGGGCAGCATCGACACGATTCCAGTTCGATTC
ACTCGGAGGACGACTGAACTACGACATGGATATGGAGAGCCCAACAGTAT
CAGCAGTCGCAGGCACCTACCGCCGTGTCAGTCCAATGCAATGGCGGAAG
ACAGGCGCCGGAAATGGTCAACACCAAGCTGCCAACATGGGCAGATGCCG
GGCGTATGGCCAATGGCCGTCAGGGCATTATGCCAGATCTGTACTGTTCG
CGTTCTTGAATACATCGACAGAACCTGTACGGGACCGCTCTGTATGCGTT
GCACTTGACAAGACTGAATCCTGAATTGGTAGCCAAAGACAACGGCCCTA
TTCAGAAAGT
FMO01175.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:15:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
bib-RB | 3276 | CG4722-RB | 302..1406 | 5..1094 | 5030 | 97.9 | Plus |
bib-RA | 3276 | CG4722-RA | 302..1406 | 5..1094 | 5030 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:15:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9993266..9993648 | 707..1077 | 1215 | 94.5 | Plus |
2L | 23513712 | 2L | 9992254..9992462 | 499..707 | 1045 | 100 | Plus |
2L | 23513712 | 2L | 9984946..9985146 | 5..205 | 1005 | 100 | Plus |
2L | 23513712 | 2L | 9986787..9986956 | 204..373 | 835 | 99.4 | Plus |
2L | 23513712 | 2L | 9987600..9987727 | 372..499 | 640 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:15:52 has no hits.
FMO01175.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:41:32 Download gff for
FMO01175.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4722-RA | 295..1404 | 1..1094 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:41:39 Download gff for
FMO01175.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
bib-RA | 297..1406 | 1..1094 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:03:34 Download gff for
FMO01175.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
bib-RA | 297..1406 | 1..1094 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:03:34 Download gff for
FMO01175.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9992255..9992462 | 500..707 | 100 | -> | Plus |
2L | 9984941..9985146 | 1..205 | 99 | -> | Plus |
2L | 9986789..9986955 | 206..372 | 99 | -> | Plus |
2L | 9987601..9987727 | 373..499 | 100 | -> | Plus |
2L | 9993267..9993668 | 708..1094 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:41:39 Download gff for
FMO01175.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9984941..9985146 | 1..205 | 99 | -> | Plus |
arm_2L | 9986789..9986955 | 206..372 | 99 | -> | Plus |
arm_2L | 9987601..9987727 | 373..499 | 100 | -> | Plus |
arm_2L | 9992255..9992462 | 500..707 | 100 | -> | Plus |
arm_2L | 9993267..9993668 | 708..1094 | 94 | | Plus |