FMO01184.5prime Sequence
794 bp (-2 high quality bases) assembled on 2008-03-04
> FMO01184.5prime
ATAATACAAAGTTATCAATCGACATGAGCAGATTGGGCTTTGATCAATTC
CCGGACTACCAGGTGCCCGGCATGAAGCGTCCTGATTTCTCGCCCTACGA
GTCCAATGGCGGCTCCTCTGTGGCCATCGCCGGAGATGACTTTGCCGTAA
TTGCAGCGGACACCCGCCTGAGCAGCGGCTACAACATTCACTCGCGAACG
CAGAGTAAACTCTTTAAACTCTCGCCCCAGACAGTGTTGGGTTCCGCAGG
CTGCTGGGCGGACACGCTCTCGTTGACCGGATCGATTAAGGTGCGCATGC
AGAGCTACGAGCATACCCATCTGCGCACCATGACCACTGAGGCCGTGGCC
CAGATGCTCTCCATCGCCGTGTTCGATGCGGCCGCTTCTTCCCGTACTAC
CTGTCTAACATTCTGGGGTGGAATTGACAACGAGGGCAAGGGCATCGTCT
ACTCCTACTATCCCAACGGTCACTGCGAAAAGGATAAATACCGGGCCGGC
GGAAATGACGGGGCCCTGGTTGCAACCGGTGCTGGACAACCAGATTGGAC
CCAAAAACTTGAATTTGGAAGACCCGAAAAAATCAGTTAACCAAAGATCG
GGCCGTGAACCTTGCCTCCGAAACCTTCCTCCCTGGCGCTGAACGCGAAA
TCTAAACCGGCGACTCTGGGCTGATCAAATCATAACAATGAGGGAATGGA
GTGCGGACTCTGACGCTGATACAAGACGCAAGCTTTCCAGAACATTCGAT
TGCCGGCCGGGCCCAGGTTAGGTGTTCTTATTCATAATCATAAC
FMO01184.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:17:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prosbeta6-RA | 944 | CG4097-RA | 99..796 | 22..718 | 2595 | 92.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:17:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16609591..16610155 | 678..112 | 1980 | 91.9 | Minus |
| 3L | 28110227 | 3L | 16610230..16610320 | 112..22 | 425 | 97.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:17:55 has no hits.
FMO01184.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:42:14 Download gff for
FMO01184.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4097-RA | 98..808 | 16..727 | 91 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:42 Download gff for
FMO01184.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosbeta6-RA | 95..805 | 16..727 | 91 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:01:13 Download gff for
FMO01184.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosbeta6-RA | 95..805 | 16..727 | 91 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:01:13 Download gff for
FMO01184.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16609567..16610154 | 113..700 | 91 | <- | Minus |
| 3L | 16610230..16610324 | 16..112 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:46:42 Download gff for
FMO01184.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16602667..16603254 | 113..700 | 91 | <- | Minus |
| arm_3L | 16603330..16603424 | 16..112 | 94 | | Minus |
