FMO01187.5prime Sequence
1207 bp (920 high quality bases) assembled on 2008-03-04
> FMO01187.5prime
CAGTCGACATGATCTGGTCTGGCAACGCCAGATATTCAAATGTTCAGAAT
TCGAGCATGGTGCCTCCGTCACGACCCAATGTCACCCGTCTGTCGGACGA
GTCCGTGATGCTGCGCTGGAGTGTGCCACAAAACTCTGGACTCCAGATCA
CCTTTTTCAAGGTGCAGTATCGCATGTTGGGCGACGGAAAAAATCGGAGG
AAGAACTGGCAGACGACCAGCGACAATATCCCGTACGGAAACGCGCACGG
ATCCGGGCCTGGCCAGGGGAACAGTCACTGGCGGGCGCGGAACCGGGACA
GGGAGTATGAAATGGGCAATCCGCCCAAGAACTTCACCTCCTCCGTTACG
GGACTGACCGCTGGCAAGTACTACCGCTTCCGGATCGTGGCGGTGTACTC
CAATAACGACAACAAGGAGGGTTTTTTCCTCCCTCAAGTTCTTCCTGCAG
AATGGAACGTCCAAGTCGAATCTGCCAGTGCCGGAACTACGCGAGGTGGA
GACGCTTTCCGAGTCGGCCGTGGTGCTCCATTGGTCCCTGGTATCCTCGA
CTCAAAATGAGGATATAGACGGGTACTATGCCTACTATAGGCCAGCGGAC
TCAGCAGCGGAGTATTTGAAGGCCACGGTGGATGGCGGAATGAGCAGGAG
CTTCAAGATAGACCTCCTTCGTCCAGGAACCCCTTATGAGTTCAAATTGC
AATCGTTCAACTCCGACGCAGCCTCTGAATTCAGTGCTATTCGGCAAGCG
AGGACCAGAAAAACGCACGAGCAACCGGCTTCATCTTCGGCCACGCCAGT
GCCAGCCAATAAGGCAGTGGAACAGCACCAGAACTCCTTTATATCCACTG
ATCGCAGTGCCGCTGGCGGAGGCATACTACTCCTCATCGCCTCATTGGTG
GTCTGCCTTTGCCTAAAGAGACGGGAAACTCTCAGCCGGAGATGAGAACA
AACCGCAATTGGAACACATCAGGCGGACTTTGTACCTCCGCGTCTGGGGA
GTTGGTGCCACCAAAAGTGGCGATGTAAGGCGCCTCACGGATTGATTCGA
GATGAATATTACGCCCATCGCTGCCAGGAACCGCATCGAATAGACACCTG
ACTGCATCGATGCTTTCCACGTCAAGCGTACATTCGCTGGACAGGCACAC
TCTGATGGCAAGGCACTGAACATACCCACACGATAGCTACGCCGGCGCTG
CGGTGTT
FMO01187.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:14:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
boi-RA | 2721 | CG32796-RA | 194..1262 | 9..1067 | 4865 | 97.8 | Plus |
boi-RG | 4544 | CG32796-RG | 1739..2764 | 52..1067 | 4650 | 97.7 | Plus |
boi-RF | 4509 | CG32796-RF | 2025..3050 | 52..1067 | 4650 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:14:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 2446890..2447597 | 760..52 | 3405 | 99 | Minus |
X | 23542271 | X | 2446643..2446824 | 941..761 | 765 | 98.4 | Minus |
X | 23542271 | X | 2447657..2447699 | 51..9 | 215 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:14:56 has no hits.
FMO01187.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:41:41 Download gff for
FMO01187.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32796-RB | 1695..2744 | 48..1083 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:46:38 Download gff for
FMO01187.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
boi-RA | 185..1278 | 1..1083 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:03:11 Download gff for
FMO01187.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
boi-RA | 189..1282 | 1..1083 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:03:11 Download gff for
FMO01187.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 2446642..2446824 | 761..941 | 97 | <- | Minus |
X | 2446890..2447597 | 52..760 | 99 | <- | Minus |
X | 2447657..2447704 | 1..51 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:46:38 Download gff for
FMO01187.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 2340675..2340857 | 761..941 | 97 | <- | Minus |
arm_X | 2340923..2341630 | 52..760 | 99 | <- | Minus |
arm_X | 2341690..2341737 | 1..51 | 94 | | Minus |