FMO01196.5prime Sequence
696 bp (696 high quality bases) assembled on 2008-03-04
> FMO01196.5prime
TAAAATACGAAGTTATCAGTCGACATGTATCTGGATACGAAAAACCTGAC
AGCCAGCAGCACTTCAGCACTGACAGCGGCCACAGCATCGAACTCAAAGT
CAACACGGCGCATGCGTAACGTGTGGAAACCGCTGAGTCGCCTACTGAAA
GTGGGTGGCAAAGGTCGCACCGCACAGGCGACCTTGGCCCATCCCAACAA
CGTGGATCTCAACAACACACAGCAGCAGCAACAGCAGCAGCAGCAGGAGT
TGCTCATTGAAGATGACACCAAGTCAACGCCAGAGGAGTCTATCCACAAG
TACGGTCTGGAGCTGAGGCAATTGCCCGAGGAGGAGCAGGTGTCCCTCAC
CCAACCGCCCAACACACCCACATTGATTAGCAGCGTGCATGTGGACAAGG
TCAGCGCCCAGAGCTGCGGCAACTGCCAACACGGACGCAACTGCCAGCAT
CGACATCACAGCAGCAGCAACATCAACAGTAGCAGCAGCAGCAGCAATAT
GAACAGCAGCAGTGCAACACAGTTGCCCAGTAATCTCTGGGATCTGCAGT
TGCCCCTCCAATACATCAGCACGGACAATGGCACCTTCTTCTGGGCCAAC
ACCCAGGATCGGGTGGACGATGATCTTCTGCACGCCTTGCTTTGACAGAG
CTTCAGTCAGCTGCCCGGAACGCTCTGCGCAAGCTTTCTAGACCTT
FMO01196.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:45:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
E(spl)m2-BFM-RA | 957 | CG6104-RA | 107..762 | 23..678 | 3235 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:45:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 26016709..26017364 | 678..23 | 3235 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:45:09 has no hits.
FMO01196.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:41:38 Download gff for
FMO01196.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6104-RA | 102..767 | 17..686 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:43:59 Download gff for
FMO01196.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(spl)m2-BFM-RA | 102..767 | 17..686 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:31:59 Download gff for
FMO01196.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(spl)m2-BFM-RA | 102..767 | 17..686 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:31:59 Download gff for
FMO01196.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 26016704..26017369 | 17..686 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:43:59 Download gff for
FMO01196.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 21842426..21843091 | 17..686 | 98 | | Minus |