FMO01202.5prime Sequence
809 bp (809 high quality bases) assembled on 2008-03-12
> FMO01202.5prime
TTAATACAAAGTTATCAGTCGACATGACGAACATGCGGCCGCCGCAGAAG
TCCAAGCTGCTGAAGGTCGTCATACTGGGCGACGGAGGCGTTGGCAAGTC
CGCCCTGCTCACCCGATTCGTCGCCAATCGCTACGAGGAGAACAACTTCC
ACACCATCGGCGTGGAGTTCATGAACAAGGACATAGTCGTCGACGGGGAG
CGCTACACTCTGCAGATATGGGACACCGCTGGCCAGGAGCGATTCCGGGC
TCTACGCACCCCGTTCTACAGAGGATCGGACATCTGTCTGCTCTGCTACG
CACTCGACGACCGGGACAGCTTGAAGGGATTGGGTGTGTGGCGCAATGAG
TTCCTCAACTACGCAGATGTGGACCAGGACAAGTTTCCATTCATCGTGGT
GGGAAATAAGAACGACATTCCGGCGCAGAAGCGACAGGTGAGCTCCGACG
CAGTGCAGCAGTGGTGCGCGGAGCAGAAGGTGGCCTGCCACATCGAGACG
TCATCGAAGGCGGCAACCAATGTGACGGATGCGTTCGTCCTTGGCCTTCG
CCAGTGGCGGCACATGGAGTGCGTGGCCGAGGCGGAACTGCGCCAGCACG
GCGACACCATTGACCTCACCCGCCCCATTCGCCTGGTGCAGCGGCGCATC
TGTTGCACAGGCGGAGGAGGCGGTGGCGGCGGCGTATGGCAGGACGCGGA
TGGCGATGATGCCGCCATGCACAGTCCGGGCAAGAAAGTGTTCGGCAGAA
GCGCAACGCCAGCAAGGCGTCTAGCCACCAATTATCGGCTAGCAAGCTTT
CTAGACCAT
FMO01202.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:16:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rab9-RA | 1604 | CG9994-RA | 299..1066 | 24..791 | 3750 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:16:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19434921..19435303 | 409..791 | 1775 | 98.7 | Plus |
| 2L | 23513712 | 2L | 19434665..19434861 | 214..410 | 985 | 100 | Plus |
| 2L | 23513712 | 2L | 19432872..19433063 | 24..215 | 960 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:16:20 has no hits.
FMO01202.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:45:17 Download gff for
FMO01202.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9994-RA | 272..1052 | 16..797 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:46:50 Download gff for
FMO01202.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rab9-RA | 291..1071 | 16..797 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:03:43 Download gff for
FMO01202.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rab9-RA | 291..1071 | 16..797 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:03:43 Download gff for
FMO01202.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19432864..19433063 | 16..215 | 98 | -> | Plus |
| 2L | 19434667..19434861 | 216..410 | 100 | -> | Plus |
| 2L | 19434923..19435308 | 411..797 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:46:50 Download gff for
FMO01202.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19434667..19434861 | 216..410 | 100 | -> | Plus |
| arm_2L | 19432864..19433063 | 16..215 | 98 | -> | Plus |
| arm_2L | 19434923..19435308 | 411..797 | 97 | | Plus |
