Clone FMO01205 Report

Search the DGRC for FMO01205

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:12
Well:5
Vector:pMK33-CFH-BD
Associated Gene/Transcriptwds-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO01205.5prime Sequence

1213 bp (998 high quality bases) assembled on 2008-03-12

> FMO01205.5prime
ATAATACCAAGTTATCAGTCGACATGGTGCCCATCGGAGCCCTGCACGGC
GGCCATCCCGGCGTAGTGCATCCGCCACAGCAACCACTGCCCACGGCGCC
CAGCGGCCCAAACTCGCTGCAGCCGAACTCGGTGGGCCAGCCGGGGGCCA
CCACCTCCTCGAACAGCAGCGCCTCCAACAAGAGCTCGCTATCCGTCAAG
CCCAACTACACGCTCAAGTTCACGCTGGCCGGGCACACCAAGGCGGTGTC
GGCGGTCAAGTTCAGTCCGAATGGCGAGTGGCTGGCCAGCTCCTCCGCTG
ATAAACTAATCAAAATCTGGGGAGCATACGATGGCAAGTTCGAGAAGACC
ATTTCGGGCCACAAGCTGGGCATCAGCGATGTGGCCTGGAGCTCAGACTC
GCGACTCCTCGTGAGCGGCAGTGATGACAAGACGCTCAAGGTCTGGGAGC
TGAGCACCGGGAAGAGCTTGAAAACTCTGAAGGGCCACAGCAACTATGTG
TTCTGCTGCAACTTTAATCCGCAGTCCAATCTGATCGTCTCCGGCAGCTT
CGACGAGAGCGTTCGCATATGGGATGTGCGCACCGGCAAGTGTCTGAAGA
CTCTACCCGCCCATTCCGATCCCGTTTCGGCGGTACATTTCAATCGCGAC
GGATCGCTGATCGTGAGCAGCAGCTACGACGGCCTCTGTCGCATATGGGA
CACGGCCAGTGGACAGTGCTTGAAAACCCTGATCGACGACGACAATCCGC
CCGTCAGCTTTGTAAAGTTCTCGCCCAATGGCAAGTACATTTTGGCCGCC
ACGCTGGATAAATACGCTCAAGTTGTGGGACTACTCGAAAGGCAAGTGCC
TGAAGACGTATACGGTCACAAGAATGAGAAGTACTGCATATTCGCTCAAC
TTCTCGGTGACGGGAGGAAAGTGGATCGTGAGTGGCAGCGAGGACACATG
GTCTACATTTGGAATCTGCAGAGCAGGAGGTGGTGGCAAAGCTGCAGGAC
CACCGATACGTCTGTGACTCGCCTGCCATCCCACGGAAAAATCATGCTCC
GGCGGCGCTCGAGAACGACAGAACATCAAGCTTGGGAAGTCGGATACAGC
AAGCTCTCAGAACATTCGTTGGCGCGCGGGCCAGTAAGGGCCTATCTAAA
CCAATCTAATCAATTCACACATAGCTAAGAAATCCTGGCATGACTATGGG
CGTGGAAATTTCT

FMO01205.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:12
Subject Length Description Subject Range Query Range Score Percent Strand
wds-RB 1973 CG17437-RB 297..1382 21..1098 4945 97.8 Plus
wds-RA 1634 CG17437-RA 297..1382 21..1098 4945 97.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:11
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2586761..2587386 295..921 2975 99.4 Plus
X 23542271 X 2586276..2586549 21..294 1355 99.6 Plus
X 23542271 X 2587439..2587626 920..1098 350 87.8 Plus
Blast to na_te.dros performed on 2014-11-28 20:15:11 has no hits.

FMO01205.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:45:19 Download gff for FMO01205.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17437-RA 298..1385 17..1098 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:32:29 Download gff for FMO01205.5prime
Subject Subject Range Query Range Percent Splice Strand
wds-RA 295..1382 17..1098 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:54:14 Download gff for FMO01205.5prime
Subject Subject Range Query Range Percent Splice Strand
wds-RA 295..1382 17..1098 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:54:14 Download gff for FMO01205.5prime
Subject Subject Range Query Range Percent Splice Strand
X 2586274..2586549 17..294 98 -> Plus
X 2586761..2587386 295..921 99 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:32:29 Download gff for FMO01205.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 2480307..2480582 17..294 98 -> Plus
arm_X 2480794..2481419 295..921 99 -> Plus