FMO01205.5prime Sequence
1213 bp (998 high quality bases) assembled on 2008-03-12
> FMO01205.5prime
ATAATACCAAGTTATCAGTCGACATGGTGCCCATCGGAGCCCTGCACGGC
GGCCATCCCGGCGTAGTGCATCCGCCACAGCAACCACTGCCCACGGCGCC
CAGCGGCCCAAACTCGCTGCAGCCGAACTCGGTGGGCCAGCCGGGGGCCA
CCACCTCCTCGAACAGCAGCGCCTCCAACAAGAGCTCGCTATCCGTCAAG
CCCAACTACACGCTCAAGTTCACGCTGGCCGGGCACACCAAGGCGGTGTC
GGCGGTCAAGTTCAGTCCGAATGGCGAGTGGCTGGCCAGCTCCTCCGCTG
ATAAACTAATCAAAATCTGGGGAGCATACGATGGCAAGTTCGAGAAGACC
ATTTCGGGCCACAAGCTGGGCATCAGCGATGTGGCCTGGAGCTCAGACTC
GCGACTCCTCGTGAGCGGCAGTGATGACAAGACGCTCAAGGTCTGGGAGC
TGAGCACCGGGAAGAGCTTGAAAACTCTGAAGGGCCACAGCAACTATGTG
TTCTGCTGCAACTTTAATCCGCAGTCCAATCTGATCGTCTCCGGCAGCTT
CGACGAGAGCGTTCGCATATGGGATGTGCGCACCGGCAAGTGTCTGAAGA
CTCTACCCGCCCATTCCGATCCCGTTTCGGCGGTACATTTCAATCGCGAC
GGATCGCTGATCGTGAGCAGCAGCTACGACGGCCTCTGTCGCATATGGGA
CACGGCCAGTGGACAGTGCTTGAAAACCCTGATCGACGACGACAATCCGC
CCGTCAGCTTTGTAAAGTTCTCGCCCAATGGCAAGTACATTTTGGCCGCC
ACGCTGGATAAATACGCTCAAGTTGTGGGACTACTCGAAAGGCAAGTGCC
TGAAGACGTATACGGTCACAAGAATGAGAAGTACTGCATATTCGCTCAAC
TTCTCGGTGACGGGAGGAAAGTGGATCGTGAGTGGCAGCGAGGACACATG
GTCTACATTTGGAATCTGCAGAGCAGGAGGTGGTGGCAAAGCTGCAGGAC
CACCGATACGTCTGTGACTCGCCTGCCATCCCACGGAAAAATCATGCTCC
GGCGGCGCTCGAGAACGACAGAACATCAAGCTTGGGAAGTCGGATACAGC
AAGCTCTCAGAACATTCGTTGGCGCGCGGGCCAGTAAGGGCCTATCTAAA
CCAATCTAATCAATTCACACATAGCTAAGAAATCCTGGCATGACTATGGG
CGTGGAAATTTCT
FMO01205.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
wds-RB | 1973 | CG17437-RB | 297..1382 | 21..1098 | 4945 | 97.8 | Plus |
wds-RA | 1634 | CG17437-RA | 297..1382 | 21..1098 | 4945 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 2586761..2587386 | 295..921 | 2975 | 99.4 | Plus |
X | 23542271 | X | 2586276..2586549 | 21..294 | 1355 | 99.6 | Plus |
X | 23542271 | X | 2587439..2587626 | 920..1098 | 350 | 87.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:15:11 has no hits.
FMO01205.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:45:19 Download gff for
FMO01205.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17437-RA | 298..1385 | 17..1098 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:32:29 Download gff for
FMO01205.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wds-RA | 295..1382 | 17..1098 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:54:14 Download gff for
FMO01205.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wds-RA | 295..1382 | 17..1098 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:54:14 Download gff for
FMO01205.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 2586274..2586549 | 17..294 | 98 | -> | Plus |
X | 2586761..2587386 | 295..921 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:32:29 Download gff for
FMO01205.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 2480307..2480582 | 17..294 | 98 | -> | Plus |
arm_X | 2480794..2481419 | 295..921 | 99 | -> | Plus |