FMO01206.5prime Sequence
1072 bp (993 high quality bases) assembled on 2008-03-12
> FMO01206.5prime
AATAAACAAAGTTATCAGTCGACATGGCAAGCATAGTACTTATAGCTTGC
TTGGCTATATTGGGATTAATTATTACAATCGCTCTTTTTCTGGCTGGAGG
ATACTTGTGGTGGAGGCATAAAAGATCACAGTTACAGTTTATTGAACCAA
ATGAAGATGAGGAATCTAGTAGTTATAGTCTTCGGGCTGCTCAGGATATT
GTTGACTCTGGTAATCCACCTACAAAACCGCAAGTGCCGGTGGCACATGC
TATCACGACTCCTCTCCAAAATAATATTAACAGGAAATTAAATGGATTTT
TAAGTCTTAGAACTCCTTTGATTGGCGGGTCGGGGGCCTCTCAAACAAAA
CCGCAAATCATTTCTTCAGTTGGAAATCCTGGAGATGGGACTACGAAAGA
TTCTGCAAATAAAAGTATCTCAATGACAGACATGTATTTGGATAGCACCG
ATCCAAGTGAAAATGTTGGGCAAATACATTTCTCCTTGGAGTATGATTTC
CAAAACACAACATTAATTTTGAAAGTTCTTCAAGGAAAAGAGCTTCCAGC
AAAAGATTTGAGTGGTACTTCCGATCCATATGTTCGTGTAACGCTGTTAC
CAGATAAAAAGCATAGATTGGAAACCAAAATAAAACGGCGAACCCTTAAT
CCACGATGGAATGAAACATTTTATTTTGAAGGTTTTCCAATTCAAAAACT
TCAATCACGTGTTTTACACTTACATGTTTTTGATTACGATCGGTTTTCAA
GAGATGACTCCATAGGGGAAGTATTTCTTCCTTTATGTCAGGTTGACTTT
GCTGGAAACAATCTTTTTGGAAGGCTTTAAAGCCCCCTGCAAAGGATAAA
TGCGGAGAACTTCTCTCCTCCCTTTGCTATCACCCGTCGAACTCAATTTG
ACTTTAACACTAATTAAAGCGAGAAATTTGAAAGCCAAAGATATCAACGG
AAATCTGATCCATACGTAAAGGTGTGGCTACAGTTTGGCGATAAAGTTGC
AAGCTTTCTAGACAATTCGTTCGCGCGCGGCCCAGGTAGTGGTCTAATCA
TAATCCTATCTATCATAATCCC
FMO01206.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:31:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Syt7-RM | 2830 | CG2381-RM | 123..1100 | 21..995 | 4815 | 99.7 | Plus |
| Syt7-RA | 2794 | CG2381-RA | 88..1064 | 22..995 | 4810 | 99.7 | Plus |
| Syt7-RB | 2684 | CG2381-RB | 43..1019 | 22..995 | 4810 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:31:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 282434..282738 | 712..408 | 1525 | 100 | Minus |
| 4 | 1348131 | 4 | 305015..305179 | 185..21 | 825 | 100 | Minus |
| 4 | 1348131 | 4 | 281729..281894 | 953..790 | 730 | 98.8 | Minus |
| 4 | 1348131 | 4 | 302386..302527 | 325..184 | 710 | 100 | Minus |
| 4 | 1348131 | 4 | 281946..282028 | 793..711 | 415 | 100 | Minus |
| 4 | 1348131 | 4 | 302242..302324 | 407..325 | 415 | 100 | Minus |
| 4 | 1348131 | 4 | 280500..280538 | 995..957 | 195 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:31:38 has no hits.
FMO01206.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2010-07-30 09:24:34 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:27:17 Download gff for
FMO01206.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syt7-RB | 38..1028 | 14..1002 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:15:16 Download gff for
FMO01206.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syt7-RM | 118..1100 | 15..995 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:15:16 Download gff for
FMO01206.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 305016..305184 | 12..184 | 97 | | Minus |
| 4 | 281724..281892 | 792..957 | 98 | <- | Minus |
| 4 | 281948..282028 | 711..791 | 100 | <- | Minus |
| 4 | 282436..282738 | 408..710 | 100 | <- | Minus |
| 4 | 302242..302323 | 326..407 | 100 | <- | Minus |
| 4 | 302386..302526 | 185..325 | 100 | <- | Minus |
| 4 | 280497..280537 | 958..999 | 92 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:27:17 Download gff for
FMO01206.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 323012..323152 | 185..325 | 100 | <- | Minus |
| arm_4 | 303062..303364 | 408..710 | 100 | <- | Minus |
| arm_4 | 322868..322949 | 326..407 | 100 | <- | Minus |
| arm_4 | 302350..302518 | 792..957 | 98 | <- | Minus |
| arm_4 | 302574..302654 | 711..791 | 100 | <- | Minus |
| arm_4 | 301123..301163 | 958..999 | 92 | <- | Minus |
| arm_4 | 325642..325810 | 12..184 | 97 | | Minus |
