FMO01207.3prime Sequence
542 bp (-542 high quality bases) assembled on 2008-03-12
> FMO01207.3prime
ATGGTCTAGAAAGCTTGCTGTGTTCCGAATCTTGCCGGGCACGTAGTTCT
TATCTATGACATTCTCCTGCAGGAACATATGCAGGCAGCGCTCGTTCTGC
GCCAAAAAGATGTCCGGCTATCTTGTTGATGAAGGCCTCCAGTCCCTTGC
GCCGCTCCTCGATGAAGCTTTCGTCAAAGATGCCCTCGTCGCCGCGGAAG
GGCATCTGCCGCTTCCATGCCTTTCCTGGGAGTGGTGGCACCACAATCTT
GCTATCCCGCTCCAGCTCGTTTCGCAGCCACTCAAAGTCGCTGTAGCGTC
GCCTGACACTGGACTCCTTTACCTTAAAGACGGGCAGATTGGTCCGCATC
CGGACCTCGTAGTCCGTGTAGCGCTTCTTGCCCGCCGCCATGGTGGTCAG
CGGATTGACCACGTCGATCTCCAGGAAGTTGGCGGGCACGGCGTACGCAT
CGTCCAGTGTTTGCTTCTTCACGTTTAGGCGGCGGGTGGCGTCGGCGGTT
CCATCGGACTCAACCATCATGTCGACTGATAATTGTTTTTAT
FMO01207.3prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:32:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Snx3-RB | 1860 | CG6359-RB | 314..814 | 520..19 | 2440 | 99.2 | Minus |
Snx3-RA | 1426 | CG6359-RA | 314..814 | 520..19 | 2440 | 99.2 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:32:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 12629220..12629449 | 249..19 | 1060 | 98.3 | Minus |
3R | 32079331 | 3R | 12628344..12628520 | 520..344 | 885 | 100 | Minus |
3R | 32079331 | 3R | 12628888..12628984 | 344..248 | 485 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:32:04 has no hits.
FMO01207.3prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:45:21 Download gff for
FMO01207.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6359-RA | 297..813 | 8..528 | 97 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:27:34 Download gff for
FMO01207.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Snx3-RA | 307..823 | 8..528 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:15:33 Download gff for
FMO01207.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Snx3-RA | 307..823 | 8..528 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:15:33 Download gff for
FMO01207.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 12629222..12629458 | 8..247 | 96 | | Minus |
3R | 12628337..12628520 | 344..528 | 97 | -> | Minus |
3R | 12628889..12628984 | 248..343 | 100 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:27:34 Download gff for
FMO01207.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 8454059..8454242 | 344..528 | 97 | -> | Minus |
arm_3R | 8454611..8454706 | 248..343 | 100 | -> | Minus |
arm_3R | 8454944..8455180 | 8..247 | 96 | | Minus |