FMO01211.5prime Sequence
904 bp (904 high quality bases) assembled on 2008-03-12
> FMO01211.5prime
AAAATACAAAGTTATCAGTCGACATGAACAAACTGAAATCCAGCACGCAC
CGCGATAAGGTGAAGAAGTTCATATCGCTGACACACACGGGGGAACAGAC
GGCAATATTCTGTTTGCAACAGAACGACTGGAAATTCGAGTTGGCCAGCG
ACAATTACTTCCAGAATCCGGAGTACTATTACCGGGAGTTGGATCGCAAG
CGCATCGAGCAGCTATTCATGCGCTATCGGGATCCCAGTGATCCCCTAAA
GATCGGATCCCAGGGCGTAATCCACTTCCTGGAGGACTTGGACCTGAAGC
CAGACTCAAAACTGGTGCTGATCATAGCGTGGAAATTCCACGCCGAGGTG
CAGTGCGAGTTCTCGCGTGATGAGTTTATCAATGGCATGTGCGACCTGGG
CATCGATAGCATCGACAAGCTAAAGACCAAGCTGCTCATCCTTGAGCAGG
AGCTGAACGACGCCGGCAAGTTCAAGGACTTTTACCACTTTACCTTCAAC
TACGCCAAGGATCCGGGGCAAAAGGGCATTGACCTGGAAATGGCAATCGC
CTACTGGTGCATCGTTCTTAGTGGGCGCTTCAAGTTCTTGGACATCTGGT
GCCAGTTCCTCGAGGAGAAACACAAGCGGGCCATCTCGCGAGATACGTGG
AACCTGCTGCTCGACTTTGCCACCAACATCGACGACCGGATGAGCAACTA
CGATTCGGAGGGCGCCTGGCCGGTTCTAATAGACGACTTTGTGGAGTGGT
GCCAGGAGAACGATCATCTCAAGGAGGACTCCTCGCCGGCATCCGGCTAC
CAGCAGCAGTCCAGTGCTAGCTCCAGCTCCCAAAAGACATATCCAGCGCC
TACCAGACCTCGCACAGTACAAACATGAACTATGGCGCAAGCTTTCTAGA
CCAT
FMO01211.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:44:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7427-RE | 1226 | CG7427-RE | 213..1076 | 24..886 | 4280 | 99.8 | Plus |
| CG7427-RA | 1601 | CG7427-RA | 301..1164 | 24..886 | 4280 | 99.8 | Plus |
| CG7427-RD | 1472 | CG7427-RD | 461..1322 | 26..886 | 4270 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:44:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15564261..15565122 | 26..886 | 4245 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:44:53 has no hits.
FMO01211.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:45:14 Download gff for
FMO01211.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7427-RA | 283..1156 | 16..890 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:19:30 Download gff for
FMO01211.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7427-RA | 294..1167 | 16..890 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:35:14 Download gff for
FMO01211.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7427-RA | 294..1167 | 16..890 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:35:14 Download gff for
FMO01211.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15564259..15565125 | 23..890 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:19:30 Download gff for
FMO01211.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15557359..15558225 | 23..890 | 99 | | Plus |
