FMO01225.5prime Sequence
575 bp (575 high quality bases) assembled on 2008-03-12
> FMO01225.5prime
ATAATACGAAGTTATCAGTCGACATGGCGCTCCAAATAGCGCAGAACAAC
CGCGACGGCCAGCAGCTGGTGGGCGCTGATCAGGGAAAGGTGGAGGTTTA
CGTGCTGTTTGCAAACACCACCTATCGCACCCTGGATCTGTACTGGGTGT
GCGAGCGGGAGCGGGAGAACATGTACCTTACCCTCAAGCCCTTCGAGGAG
GTGCGGGTGAACACGTTCACCACACACAGCTGGCTGTTCCGGGATTACTA
CACGGGCGAACGGATGCACGTACGCTCGCAGAGGATCTTTCAGCCGATTC
GGGTGCGGGTACCCAAGAGCCAGCAGAGTCCGGATCAGCTGGTTGACGTA
CGCAGCGAAGTGCTGATCTACTTTCCGATGAGATCGCTGCGCGAAAACTG
CCTCTGGCTGGTCGCCCGCTGGCTGATCCGGACGAGCAACGCGCCACGGA
GGATTATCCACGGATACCACATACCCTCGACGCTGAAGCAACAGCTGCTC
AGCCTGCTGACCTGCATCGAGTCCTATTCCCGAGTGGCGGGCACGCGACG
TCGGCGTGCAAGCTTTCTAGACCAT
FMO01225.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:16:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vhl-RB | 946 | CG13221-RB | 154..687 | 24..557 | 2640 | 99.6 | Plus |
| Vhl-RA | 1309 | CG13221-RA | 154..687 | 24..557 | 2640 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:16:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11279878..11280411 | 24..557 | 2640 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:16:27 has no hits.
FMO01225.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:45:31 Download gff for
FMO01225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13221-RA | 150..686 | 21..557 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:46:52 Download gff for
FMO01225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vhl-RA | 151..687 | 21..557 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:03:46 Download gff for
FMO01225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vhl-RA | 151..687 | 21..557 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:03:46 Download gff for
FMO01225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11279875..11280411 | 21..557 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:46:52 Download gff for
FMO01225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7167380..7167916 | 21..557 | 99 | | Plus |
