FMO01230.5prime Sequence
1184 bp (988 high quality bases) assembled on 2008-03-12
> FMO01230.5prime
ATAACAAACTTATCAGTCGACATGTTGGCCAAAAAACAGAAAATGCAGGA
GACGGACACGGAGCAAGAGGCCACGCCACATACGATACAGGCGCGCCTCG
TTTCGGACACGGGCGAGGAAGCCGGCCCGCCAATCGACCTGCCGGCAGGA
ATCACTACCCAGCAATTGGGACTGATTTGCAACGCGCTGCTGAAAAACGA
GGAAGCCACTCCATATTTGTTTTTCGTGGGCGAGGATGAGATCAAGAAGA
GCCTGGAGGACACGTTGGACTTGGCGTCAGTGGACACCGAAAACGTGATC
GATATTGTGTATCAGCCACAGGCGGTTTTCAAAGTGCGCCCAGTGACAAG
ATGCACGAGTTCCATGCCTTTTACACGCCGAGGCTGTGGTTTCGCTGAAT
TTCAGCCCGGATGGTGCTCATCTCGCCAGTGGAAGTGGCGACACCACAGT
GCGATTGTGGGATCTTAACACAGAGACACCGCACTTCACCTGCACAGGTC
ATAAGCAGTGGGTTCTGTGCGTATCCTGGGCTCCGGATGGCAAACGGTTG
GCCAGCGGTTGCAAAGCGGGCTCTATAATCATCTGGGACCCGGAGACGGG
TCAGCAGAAGGGGCGACCATTGAGTGGGCACAAGAAACACATCAACTGCC
TCGCCTGGGAACCGTATCATCGCGATCCGGAGTGCATGAAACTTGCTTCC
GCCAGTGGAGACGGGGACTGCCGGATTTGGGACGTAAAATTGGGCCAGTG
CCTTATGAACATTGCCGGACACACAAATGCTGTGACAGCAGTGAGATGGG
GTGGAGCGGGCCTTATTTATACATCCTCCAAGATCGCACAGTGAAGATGT
GGCGAGCAGCTGATGGAATCTTGTGCCGGACGTTCTCTGGCCACGCTCAC
TGGGTAAACACATTGCGCTGAGCACGATTACGTCCTGCGCACTGGTCATT
CATCGTGAGATCGCTCCAGAGCACTCAGTTTGAGCACTGAGATGCAGATC
TGCCTGACGCTACAGCGTGTGCCTGACAGGTGGAGTCGCTGTTTCTGTCG
ATGACAACACCCTCTATCTGGTGGCGAACAACGACATGCCTGAGGCCATG
ACGCACGAACTGGTCACGAGTGAATTCCCGAGGTAAGCTATTGCCTCGCC
TCATTTGCAAGGTCAGGCTCTGGTGGCGGAGCAC
FMO01230.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:46:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nle-RA | 1584 | CG2863-RA | 58..1146 | 22..1082 | 4580 | 96.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:46:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 567137..568064 | 947..22 | 4310 | 98.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:46:49 has no hits.
FMO01230.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:44:14 Download gff for
FMO01230.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2863-RA | 97..1187 | 19..1082 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:44:53 Download gff for
FMO01230.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nle-RA | 56..1146 | 19..1082 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:32:41 Download gff for
FMO01230.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nle-RA | 56..1146 | 19..1082 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:32:41 Download gff for
FMO01230.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 567089..568066 | 19..986 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:44:53 Download gff for
FMO01230.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 567089..568066 | 19..986 | 97 | | Minus |
