FMO01231.5prime Sequence
680 bp (680 high quality bases) assembled on 2008-03-12
> FMO01231.5prime
CAGTCGACATGTCCGACAATACCGAGAGCAAACTTGCGCTAGACCCGTGC
GATGTGATCGTCTTTGAGGGACCATTCAACCGCTCGGTGAGCAGGAAGCT
AGTCATCAAGAACACCAGTAAGACCCAGCGAATGGCCTTCAAGATGAAGA
CCACCACTCCAAAACTTTTTTATGTACGCCCCAACATCGGTGTCTTGGGG
CCCGAGCAGAAGGTCAGCGTTGACATATTCATGCAGCCAATTCTGCAGGA
GCAGATAAAGAAGCGTCATAAGTTCCTTCTCCTGGCCGCCGAGGTGACTG
GTGACATAAGCGATGTGCAGGAGTTTTGGAAGATGCAGAACCCGAATGAA
ACTCGGGAAACCAAGATCAAATGTGAGCTAGTCCCTTCGAAGGAGGACGA
TTTCCGTCAGGCGGGAGGTTCAGCTGTAATATCCACGGACAACAAGGACG
GAGAGGTCCATTTTGATGCCCAGGAAGTCAGTGAGCCAATGGCCAAGTTG
CTCAAGCAAGTCAGCATGCTGGAGGACGAGCATATGGCCCTCACAGACCA
GATCGACGGCTTGCGTGACCAGGCGATTGGGCGCACTTTCTTCTACATGG
CCGCCATAGTAATCATTATACTGTCCGCTGTCGCAGGCGCCTATTATGGC
AAGACTCGTTTGGCAAGCTTTCTAGACCAT
FMO01231.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:48:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fan-RA | 912 | CG7919-RA | 147..800 | 9..662 | 3270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:48:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8109278..8109931 | 9..662 | 3270 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:48:33 has no hits.
FMO01231.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:44:16 Download gff for
FMO01231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7919-RA | 110..769 | 9..670 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:02 Download gff for
FMO01231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fan-RA | 147..806 | 9..670 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:27:48 Download gff for
FMO01231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fan-RA | 147..806 | 9..670 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:27:48 Download gff for
FMO01231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8109278..8109937 | 9..670 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:02 Download gff for
FMO01231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8102378..8103037 | 9..670 | 99 | | Plus |
