Clone FMO01234 Report

Search the DGRC for FMO01234

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:12
Well:34
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG17329-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO01234.5prime Sequence

527 bp (244 high quality bases) assembled on 2008-03-12

> FMO01234.5prime
ATTATACGAAGTTATCAATCCACATGGAGAAAATCGAGAAGGAACTTGAG
CGCCCGGAGCACCAACACCAGGAGCCGACGGATCCGTCCAATGGCAATCT
GGAGGAGCCAGTCCGCTTGCTCAGGGATCACAATTTGCGGGTGAATCATC
TGAATACTCAGCGTCGTCGCATCCTACGCCTGTTGCAGGGAAAGATGCTG
CAGTATGCCACCCTGGAGGAACGTTTGCACAGGATTGGCGAACTCGTTCT
CATCGCAGAGCTCCATTCGGGTGTGAAGACACTCAATCAACGTCTGGACA
GAATGGTGGAGAATTCAACTTGCTCCATTTGCCTGTTGCCCTGGACGGAC
AACGGAATACATCGCCTGGTCTCGCTCCGTTGTGGCCATTTGTTTGGCTC
CAGCTGCATCCACATGGCCATTCGGCGCAATCATCGCTGCCCAATCTGCC
GGCGACGGGCTCGCCACTTCCACGTGCGCAGGATCTACAGTCCGAGCTTT
TTGTCTCATGCAAGCTTTCTAGACCAT

FMO01234.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:02:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG17329-RA 665 CG17329-RA 59..544 24..509 2280 97.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:02:13
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16291342..16291827 24..509 2280 97.9 Plus
Blast to na_te.dros performed on 2014-11-28 20:02:14 has no hits.

FMO01234.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:44:03 Download gff for FMO01234.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17329-RA 59..549 24..517 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:22:45 Download gff for FMO01234.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17329-RA 59..549 24..517 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:49:29 Download gff for FMO01234.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17329-RA 59..549 24..517 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:49:29 Download gff for FMO01234.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 16291342..16291832 24..517 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:22:45 Download gff for FMO01234.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16291342..16291832 24..517 97   Plus