Clone FMO01237 Report

Search the DGRC for FMO01237

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:12
Well:37
Vector:pMK33-CFH-BD
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO01237.5prime Sequence

602 bp (602 high quality bases) assembled on 2008-03-12

> FMO01237.5prime
ATAAAACGAAGTTATCAGTCGACATGGAAAACTTCAGGACCTCGAATAAT
TCTGGAGTATCACAGCGAATCCATAACACCGGGCCCACTCCCGTACTCGC
GCCCTCCGGATTAAGATCCCGCTTACTCAGCGGTTCCTCTGAGCGGAATC
CAAATGAGTATTACGGAGACTCGGACTCCTCAAGCAGCAGCAGATCTATC
GACAGAACCCCATTCCTGTTGGAGTATTCCAGCGACTCAGAGTCGTCTAG
TTCCAGTGATAGTGAAAGCTCATCGACCAGCATTAGCTTCGATAGCAGTA
TGAGCTCCACCGAATCATCAACACCAATGGGACATACAGAATCCTCAGAT
TCAAACGAGGATTCTCCTCCCAACAAACGGATCAAATCAGATGACGAGGA
GTCCAAGAAATCTGTCTTGCCCTACAACTGCCCTGTGTGCCTGGAAGATG
TCCGCGAGAAGCTACCAGTGTCCACCAATTGTGGCCACGTTTTCTGCAAA
GCGTGCATTAAGAGAGCTGTCGACACTGGCAGGGTATGCCCATTGTGCGG
AGTGGATGAGCCCGAATTCCATCGTATTTTCTTGGCAAGCTTTCTAGACC
AT

FMO01237.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:26:24
Subject Length Description Subject Range Query Range Score Percent Strand
elfless-RC 1376 CG15150-RC 226..786 24..584 2805 100 Plus
elfless-RB 1643 CG15150-RB 226..786 24..584 2805 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:26:22
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18010500..18010866 584..218 1835 100 Minus
2L 23513712 2L 18011077..18011194 141..24 590 100 Minus
2L 23513712 2L 18010934..18011011 218..141 390 100 Minus
Blast to na_te.dros performed on 2014-11-28 22:26:23 has no hits.

FMO01237.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:45:36 Download gff for FMO01237.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15150-RA 12..580 19..589 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:55 Download gff for FMO01237.5prime
Subject Subject Range Query Range Percent Splice Strand
elfless-RB 222..790 19..589 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:59:11 Download gff for FMO01237.5prime
Subject Subject Range Query Range Percent Splice Strand
elfless-RB 222..790 19..589 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:59:11 Download gff for FMO01237.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 18010496..18010865 219..589 99 <- Minus
2L 18010934..18011011 141..218 100 <- Minus
2L 18011078..18011198 19..140 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:55 Download gff for FMO01237.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18010496..18010865 219..589 99 <- Minus
arm_2L 18010934..18011011 141..218 100 <- Minus
arm_2L 18011078..18011198 19..140 98   Minus