FMO01238.5prime Sequence
743 bp (743 high quality bases) assembled on 2008-03-12
> FMO01238.5prime
CAGTCGACATGTCCAGCGATCAGGTGAATTCCCAAACGGAAATGGAAACG
GAAGCGCGAGCGCGAGCGGAGGTGGAAGTGGAGGTCGAACCAGAAGTGCT
CTCGAGAGCCAGTGTGGCCAGCTCCGTAGAAGAGACGGCACCCAGCACCA
GTCACAGTGCATCGGGAAAATCCACCGAGGCACCACTTACTGGTTGTGTG
GTGCGAATTAAGAGCGAACTGCAGGACATTCGGAAAAATCCGCCACCGAA
TTGCACCGCCGATTTGCATCACGGGGATCTTCTTCACTGGACGGCAGGTG
TGAACGGGCCAGTTGGCTCCGTATACGAAGGCGGTCACTTCCGGCTGGAT
ATACGATTTCCGGCCAGCTATCCATTCCGGGCGCCACGCATTCGGTTCAC
CACCCGAATATACCACTGCAACGTGGACAGTCGCGGCGCCATTTGCCTGG
ATGTCCTCGGCGAACGATGGTCCCCAGTGATGAATGTGGCCAAGGTTCTA
CTTTCCATTTACGTGCTGATGAGTGAGTGCAATCCAGATGATCCGCTAGT
CATGTGCATTGCCGATCAGTACAAAACCAATCGCAGGGAGCACGACAAAA
TTGCTAGACACTGGACCAAGCTGTTTGCAATGACCAAGGCGCAGGATAAG
AACAGAGAAAAGGATGCGGATCAGGGTAATGAGCAAAATCAGGAAGAAAA
TCCAATGCCAGGACAGCAAGGAAATGCAAGCTTTCTAGACCAT
FMO01238.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:16:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2574-RA | 896 | CG2574-RA | 95..811 | 9..725 | 3555 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:16:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 12408955..12409442 | 9..496 | 2440 | 100 | Plus |
| X | 23542271 | X | 12409508..12409740 | 493..725 | 1135 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:16:47 has no hits.
FMO01238.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:44:23 Download gff for
FMO01238.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2574-RA | 60..786 | 1..729 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:41:52 Download gff for
FMO01238.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2574-RA | 88..814 | 1..729 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:03:56 Download gff for
FMO01238.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2574-RA | 88..814 | 1..729 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:03:56 Download gff for
FMO01238.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12409510..12409743 | 495..729 | 98 | | Plus |
| X | 12408948..12409440 | 1..494 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:41:52 Download gff for
FMO01238.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 12302981..12303473 | 1..494 | 99 | -> | Plus |
| arm_X | 12303543..12303776 | 495..729 | 98 | | Plus |
