FMO01246.5prime Sequence
1179 bp (960 high quality bases) assembled on 2008-03-12
> FMO01246.5prime
CAGTCGACATGGGCTTTGATCTAAACTGCATTGTGGGCCACGTTGACGAG
GAGCTCATCTGTCCAATTTGCACAGATGTCCTGGAGGAGCCGGTCCAGTC
ATCGGAATGCGAGCACGCCTTCTGTCGCGCCTGCATCGACAAGTGGATGA
TCCAGAAACAGATTTGCCCGGTGGACCGCTCCGGGCTACTGACCTCACAT
CTGGTGCCCGTTTCGCGCCTAATGCGCAACATGCTATCCCGCCTAAAGAT
CAAGTGCACCTTCTCGCAAAGCGGTTGTGCCCAAATGCTGGCCCTCGAGG
AGTTCCGGACCCATGTCGCCGCCTGCGAGCATAATCCCAAGGTGGTTGTC
GAGTGCAGCAAGGGGTGCGGAATGAAGGTACCCAAGGACGAGATGTCGCG
CCACAACTGTGTGTTCGAACTGCGCGAGCTGGTGGAGAAACTGGCGAAGG
AGGTTTCCGATCTGAAGCAGAAGCAATCCGATATGGAGGAGCAGAGCTCC
AGCCAGCGCCGAGAGATGGAGCTGTTCCAGTACTATATCGCAGCACTGCG
ATCGACCAATCCCATGCTGCGCAACATTGGCGAACAACTGGACCGCTTCT
CACTGATGCAGTGGGGCCATGGACTCCCTCTGGCCAACATCCATACGTGG
GGCAGTCTGATCTCCACGCCGGACAATCCCATGCACCTGATGGTGCGCGA
CGTTTTGCGTGAAAGCGGCTGTCCGATGCATATGCTCAATATGCTGGTTG
AACGTTGCCACGAGGATCGCTGGCCCGAAAGTCTGATGACGTTGGACGAT
CGCCGCGAGAACCAACATCTCATGAGTCGGTATGTCACCCGATTGGTGCC
CGGTCTGGTCATTGGCAAACCGTGCGTGGTTGTTCTGGGCGGCGAAAACA
CCCACATGCCGGAGAATCTGCGCCCATCCTCGGACTGGTCATGATCTTCG
TCGACGGGTGATGAGGTATTATTGGCGAAAGATTATTGCAGCTTTCTAGA
ACAATTCGTTGGCGCGCGCCAGTAATGGTCATAATCTAATCTAAATCATA
TCTATCACACTAGCCTAGGAGATCTGTATGATATTGGCTTGGATCCACAA
TAAAGGCCGGCGGTACCGAGTTGACAATTCGAATGAGTTCGAGTCATATC
TGGATCTCTACAAGGATTCCAGCGCGAGC
FMO01246.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:24:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9014-RB | 1377 | CG9014-RB | 154..1142 | 4..987 | 4775 | 99.2 | Plus |
CG9014-RA | 1368 | CG9014-RA | 145..1133 | 4..987 | 4775 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:24:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13722430..13723013 | 957..375 | 2855 | 99.7 | Minus |
2L | 23513712 | 2L | 13723067..13723442 | 379..4 | 1865 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:24:39 has no hits.
FMO01246.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:44:21 Download gff for
FMO01246.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9014-RA | 141..1138 | 1..992 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:47 Download gff for
FMO01246.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9014-RA | 141..1138 | 1..992 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:58:20 Download gff for
FMO01246.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9014-RA | 141..1138 | 1..992 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:58:20 Download gff for
FMO01246.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13722430..13723010 | 378..957 | 99 | <- | Minus |
2L | 13723069..13723446 | 1..377 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:47 Download gff for
FMO01246.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13722430..13723010 | 378..957 | 99 | <- | Minus |
arm_2L | 13723069..13723446 | 1..377 | 99 | | Minus |