Clone FMO01246 Report

Search the DGRC for FMO01246

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:12
Well:46
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG9014-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO01246.5prime Sequence

1179 bp (960 high quality bases) assembled on 2008-03-12

> FMO01246.5prime
CAGTCGACATGGGCTTTGATCTAAACTGCATTGTGGGCCACGTTGACGAG
GAGCTCATCTGTCCAATTTGCACAGATGTCCTGGAGGAGCCGGTCCAGTC
ATCGGAATGCGAGCACGCCTTCTGTCGCGCCTGCATCGACAAGTGGATGA
TCCAGAAACAGATTTGCCCGGTGGACCGCTCCGGGCTACTGACCTCACAT
CTGGTGCCCGTTTCGCGCCTAATGCGCAACATGCTATCCCGCCTAAAGAT
CAAGTGCACCTTCTCGCAAAGCGGTTGTGCCCAAATGCTGGCCCTCGAGG
AGTTCCGGACCCATGTCGCCGCCTGCGAGCATAATCCCAAGGTGGTTGTC
GAGTGCAGCAAGGGGTGCGGAATGAAGGTACCCAAGGACGAGATGTCGCG
CCACAACTGTGTGTTCGAACTGCGCGAGCTGGTGGAGAAACTGGCGAAGG
AGGTTTCCGATCTGAAGCAGAAGCAATCCGATATGGAGGAGCAGAGCTCC
AGCCAGCGCCGAGAGATGGAGCTGTTCCAGTACTATATCGCAGCACTGCG
ATCGACCAATCCCATGCTGCGCAACATTGGCGAACAACTGGACCGCTTCT
CACTGATGCAGTGGGGCCATGGACTCCCTCTGGCCAACATCCATACGTGG
GGCAGTCTGATCTCCACGCCGGACAATCCCATGCACCTGATGGTGCGCGA
CGTTTTGCGTGAAAGCGGCTGTCCGATGCATATGCTCAATATGCTGGTTG
AACGTTGCCACGAGGATCGCTGGCCCGAAAGTCTGATGACGTTGGACGAT
CGCCGCGAGAACCAACATCTCATGAGTCGGTATGTCACCCGATTGGTGCC
CGGTCTGGTCATTGGCAAACCGTGCGTGGTTGTTCTGGGCGGCGAAAACA
CCCACATGCCGGAGAATCTGCGCCCATCCTCGGACTGGTCATGATCTTCG
TCGACGGGTGATGAGGTATTATTGGCGAAAGATTATTGCAGCTTTCTAGA
ACAATTCGTTGGCGCGCGCCAGTAATGGTCATAATCTAATCTAAATCATA
TCTATCACACTAGCCTAGGAGATCTGTATGATATTGGCTTGGATCCACAA
TAAAGGCCGGCGGTACCGAGTTGACAATTCGAATGAGTTCGAGTCATATC
TGGATCTCTACAAGGATTCCAGCGCGAGC

FMO01246.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:24:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG9014-RB 1377 CG9014-RB 154..1142 4..987 4775 99.2 Plus
CG9014-RA 1368 CG9014-RA 145..1133 4..987 4775 99.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:24:38
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13722430..13723013 957..375 2855 99.7 Minus
2L 23513712 2L 13723067..13723442 379..4 1865 99.7 Minus
Blast to na_te.dros performed on 2014-11-28 22:24:39 has no hits.

FMO01246.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:44:21 Download gff for FMO01246.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9014-RA 141..1138 1..992 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:47 Download gff for FMO01246.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9014-RA 141..1138 1..992 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:58:20 Download gff for FMO01246.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9014-RA 141..1138 1..992 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:58:20 Download gff for FMO01246.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 13722430..13723010 378..957 99 <- Minus
2L 13723069..13723446 1..377 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:47 Download gff for FMO01246.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13722430..13723010 378..957 99 <- Minus
arm_2L 13723069..13723446 1..377 99   Minus