FMO01247.5prime Sequence
554 bp (554 high quality bases) assembled on 2008-03-12
> FMO01247.5prime
ATAAAACGAAGTTATCAGTCGACATGCCAGTCATCAAATTGCAGTCCTCC
GATGGCGAAATTTTCGAGACCGACATCGAGACTGCCAAGTGCTCGAGCAC
CATTAAGACCCTATTGGAGGATTGTCCAGTGGAAGCGGAGAACGACACTC
TTATCCCGCTGCCCAATGTGAACTCGACGATCCTGAAGAAGGTCCTCATT
TGGGCCAAGCATCATCGCGAGGACATTGCAGAGGAGAACGAAGAGGAAGC
GGCCAAGTCCGTCGCTGTGCAGATCACCCCCTGGGACGCCGAGTTCCTGT
CCATGGATCAGGGCACGCTCTTCGAACTCATCTTGGCGGCCAACTACCTG
GACATTCCCAATCTGCTGAACGCCGCCTGCATGACGGTGGCCAACATGAT
TAAAGGCCGCACGACGGAGGAGATTCGCCAGACCTTTCACATAACCAACG
ATTTCTCGCCCTCCGAGGAGGATTTGATGACGATGGAGTCGGAAGTCCCG
CAGGAGGACGAGGCGATAGAGTACGGCGAAATTATAGCAAGCTTTCTAGA
CCAT
FMO01247.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:44:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
SkpF-RA | 695 | CG12227-RA | 73..586 | 23..536 | 2570 | 100 | Plus |
SkpB-RA | 877 | CG8881-RA | 530..628 | 309..407 | 195 | 79.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:44:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23458174..23458687 | 536..23 | 2570 | 100 | Minus |
2R | 25286936 | 2R | 12139544..12139642 | 407..309 | 195 | 79.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:44:56 has no hits.
FMO01247.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:45:33 Download gff for
FMO01247.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12227-RA | 73..592 | 23..544 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:19:32 Download gff for
FMO01247.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
skpF-RA | 73..592 | 23..544 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:35:15 Download gff for
FMO01247.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SkpF-RA | 73..592 | 23..544 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:35:15 Download gff for
FMO01247.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23458168..23458687 | 23..544 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:19:32 Download gff for
FMO01247.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19345691..19346210 | 23..544 | 99 | | Minus |