FMO01250.5prime Sequence
668 bp (668 high quality bases) assembled on 2008-03-12
> FMO01250.5prime
CAGTCGACATGATTGAGTCGGAGAAGTTGAGTGGGATATATGTGATACCC
AGCTATGCTAACTCCTTGCAGTGGTTTGGAGTCTTCTTTGGCCGACAGGG
CTTGTATGCGGAAAGTGTTTTTCGATTCACAATTTTGCTCCCAGATCGTT
TTCCCGACGACAAAAGTCTTCCGAGCATAATTTTCCAGCAGGATGTGATT
CATCCCCATGTGTGCCCGTACACCCACAGTTTGGACGTGAGCCACGCCTT
CCCGGAGTGGCGCTGTGGAGAGGATCACCTTTGGCAGCTTTTAAAGTACC
TGCAAGTCATTTTCTCCGATCCCTTGGACAGTATTCGGGGCATTGAGGTA
GATAAGCTCAAAAACAGCGAGGCTGCGGAGCTGCTGATGAATAACAAGGA
GGAGTATGTTGCTCGCGTACAGGAAAATATCAAGGAGAGCAAGGAGCATA
TATTTGACACCCCACCCACCGAAGATCCGCACTACATAGTATTCGAGAAG
TTCCAGCAGGACGTGCACGGGCCCGTTCTGGAGCGCATCAAGGCCGGAAG
AAGCAAGCTGACGGAGCCTTCAGCGCAACAAGCAAATGGTGGACATGCAA
CTGGTCTGTCATGGGTTAAGGAGGGCGAGTTTAAGCCACTTAGCATTGAG
GCAAGCTTTCTAGACCAT
FMO01250.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:48:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
cbx-RB | 908 | CG10536-RB | 184..825 | 9..650 | 3210 | 100 | Plus |
cbx-RA | 1036 | CG10536-RA | 312..953 | 9..650 | 3210 | 100 | Plus |
cbx-RC | 766 | CG10536-RC | 135..456 | 9..348 | 1420 | 94.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:48:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9864593..9865070 | 650..173 | 2390 | 100 | Minus |
2R | 25286936 | 2R | 9865124..9865227 | 173..70 | 520 | 100 | Minus |
2R | 25286936 | 2R | 9865290..9865350 | 69..9 | 305 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:48:57 has no hits.
FMO01250.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:44:35 Download gff for
FMO01250.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10536-RB | 165..809 | 9..654 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:15 Download gff for
FMO01250.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
cbx-RA | 312..956 | 9..654 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:27:58 Download gff for
FMO01250.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
cbx-RA | 312..956 | 9..654 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:27:58 Download gff for
FMO01250.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9864589..9865069 | 174..654 | 99 | <- | Minus |
2R | 9865124..9865227 | 70..173 | 100 | <- | Minus |
2R | 9865290..9865356 | 1..69 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:15 Download gff for
FMO01250.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5752094..5752574 | 174..654 | 99 | <- | Minus |
arm_2R | 5752629..5752732 | 70..173 | 100 | <- | Minus |
arm_2R | 5752795..5752861 | 1..69 | 94 | | Minus |