FMO01255.5prime Sequence
1205 bp (967 high quality bases) assembled on 2008-03-12
> FMO01255.5prime
CAGTCGACATGCGAGCCTCCATTCCGCCCGGCATTCGAGTGGTGCGCGGA
CCCAACTGGATCTGGTCGAATCAAGACGACGGAGAAGGTCACGTTGGAAC
CGTTTGCGAAATCGGACGTTGCGGATCGACACATTCGCCAGAAAACACTG
TCGTGGTCAACTGGGATTCCGGACACCGGACCAACTACCGTGTGGGCTAC
CAAAACCAGTACGACTTGATAATTGTAGATAATGCTCAAGTTGGAGTTCG
TCACTCAAATGTTGTCTGCGATGGCTGTTCCAAGGCGGGTATCGCTGGCA
TAGTATTCAAGTGCGCCCAGTGTCCCAACTATCACCTATGCGCCTATTGC
TACGCAGAGGATCTGCACGATATTGAGCACCCGTTTATCCGCTACACGAC
TCCCAACTCGCTGGGCGTGAGATTGCCCATGAGAAAAGGTGCCAAGCGCA
TCCAGCTGCGAGGCATCTTTGTGGGTTCCAAAGTAGTGCGCGGTCCTGAC
TGGGAGTGGAACGAACAGGACGGCGGAGAAGGCAGGACGGGTCGGGTAAT
GGAAATCCGAGGCTGGGACAACGAATCGTGTCGCAGCGTGGCCAACGTAG
CGTGGGTAACCGGATCGACGAACGTCTACCGTCTAGGTCACAAGGGAAAC
GTTGACCTCAAGTACATTACTGCCACGTGCGGTGGTCACTACTATAAGGA
CCACATGCCTGTTCTAGGTCAGACAGAGGAGTTGCAGCCGGTGGCGCCCA
TGGTGAAGCCAAGCTTTTCCGTGGGCGACCGCGTCAAGGTTTGCCTAGAG
GTTGACGCCCTAATGAAATTGCAGCAGGCCATGGCGGATGGAATCCGCGC
ATGGTCGAGCATTTGTCCAAACTGGGCACAGTACACCGCATCACGGACAG
GGGGATATACGTGTTCAGTATGAAACTGTCCCAATCGATGGACTTTCATC
CCGCCGCAACTCGGTAAGGTTTCTCTTTCGTGTCGGTGACTGGTCACACA
TCATCACGATGCAAAAATGCAGCAGCTGGCGGAGGGTCACGGCGAATGGA
TAGAAATCATGCGCAACGCCCTTGGAAATTTGCAAGGTAATGGAGGGTAC
CGGACGGTACCTCCGCATTCAGCATTGGCACGCCTCAAGGGAACCTGGAT
CGATGTCCACTAGCTCTCCTGTCACGACGTGAGGCTCCTCACAGTGATGA
GTGAC
FMO01255.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:21:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mib2-RC | 3805 | CG17492-RC | 236..1366 | 8..1124 | 5090 | 97.6 | Plus |
mib2-RB | 3899 | CG17492-RB | 398..1528 | 8..1124 | 5090 | 97.6 | Plus |
mib2-RA | 4164 | CG17492-RA | 595..1725 | 8..1124 | 5090 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:21:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19038084..19038754 | 243..911 | 3255 | 99.7 | Plus |
2L | 23513712 | 2L | 19037802..19037972 | 74..244 | 855 | 100 | Plus |
2L | 23513712 | 2L | 19035798..19035865 | 8..75 | 340 | 100 | Plus |
2L | 23513712 | 2L | 19038815..19038974 | 911..1063 | 240 | 89.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:21:53 has no hits.
FMO01255.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:44:43 Download gff for
FMO01255.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17492-RA | 512..1623 | 1..1100 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:50 Download gff for
FMO01255.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mib2-RA | 588..1699 | 1..1100 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:55:57 Download gff for
FMO01255.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mib2-RA | 588..1699 | 1..1100 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:55:57 Download gff for
FMO01255.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19035791..19035865 | 1..75 | 96 | -> | Plus |
2L | 19037804..19037971 | 76..243 | 100 | -> | Plus |
2L | 19038085..19038754 | 244..911 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:50 Download gff for
FMO01255.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 19035791..19035865 | 1..75 | 96 | -> | Plus |
arm_2L | 19037804..19037971 | 76..243 | 100 | -> | Plus |
arm_2L | 19038085..19038754 | 244..911 | 99 | -> | Plus |