Clone FMO01255 Report

Search the DGRC for FMO01255

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:12
Well:55
Vector:pMK33-CFH-BD
Associated Gene/Transcriptmib2-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO01255.5prime Sequence

1205 bp (967 high quality bases) assembled on 2008-03-12

> FMO01255.5prime
CAGTCGACATGCGAGCCTCCATTCCGCCCGGCATTCGAGTGGTGCGCGGA
CCCAACTGGATCTGGTCGAATCAAGACGACGGAGAAGGTCACGTTGGAAC
CGTTTGCGAAATCGGACGTTGCGGATCGACACATTCGCCAGAAAACACTG
TCGTGGTCAACTGGGATTCCGGACACCGGACCAACTACCGTGTGGGCTAC
CAAAACCAGTACGACTTGATAATTGTAGATAATGCTCAAGTTGGAGTTCG
TCACTCAAATGTTGTCTGCGATGGCTGTTCCAAGGCGGGTATCGCTGGCA
TAGTATTCAAGTGCGCCCAGTGTCCCAACTATCACCTATGCGCCTATTGC
TACGCAGAGGATCTGCACGATATTGAGCACCCGTTTATCCGCTACACGAC
TCCCAACTCGCTGGGCGTGAGATTGCCCATGAGAAAAGGTGCCAAGCGCA
TCCAGCTGCGAGGCATCTTTGTGGGTTCCAAAGTAGTGCGCGGTCCTGAC
TGGGAGTGGAACGAACAGGACGGCGGAGAAGGCAGGACGGGTCGGGTAAT
GGAAATCCGAGGCTGGGACAACGAATCGTGTCGCAGCGTGGCCAACGTAG
CGTGGGTAACCGGATCGACGAACGTCTACCGTCTAGGTCACAAGGGAAAC
GTTGACCTCAAGTACATTACTGCCACGTGCGGTGGTCACTACTATAAGGA
CCACATGCCTGTTCTAGGTCAGACAGAGGAGTTGCAGCCGGTGGCGCCCA
TGGTGAAGCCAAGCTTTTCCGTGGGCGACCGCGTCAAGGTTTGCCTAGAG
GTTGACGCCCTAATGAAATTGCAGCAGGCCATGGCGGATGGAATCCGCGC
ATGGTCGAGCATTTGTCCAAACTGGGCACAGTACACCGCATCACGGACAG
GGGGATATACGTGTTCAGTATGAAACTGTCCCAATCGATGGACTTTCATC
CCGCCGCAACTCGGTAAGGTTTCTCTTTCGTGTCGGTGACTGGTCACACA
TCATCACGATGCAAAAATGCAGCAGCTGGCGGAGGGTCACGGCGAATGGA
TAGAAATCATGCGCAACGCCCTTGGAAATTTGCAAGGTAATGGAGGGTAC
CGGACGGTACCTCCGCATTCAGCATTGGCACGCCTCAAGGGAACCTGGAT
CGATGTCCACTAGCTCTCCTGTCACGACGTGAGGCTCCTCACAGTGATGA
GTGAC

FMO01255.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:21:54
Subject Length Description Subject Range Query Range Score Percent Strand
mib2-RC 3805 CG17492-RC 236..1366 8..1124 5090 97.6 Plus
mib2-RB 3899 CG17492-RB 398..1528 8..1124 5090 97.6 Plus
mib2-RA 4164 CG17492-RA 595..1725 8..1124 5090 97.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:21:52
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19038084..19038754 243..911 3255 99.7 Plus
2L 23513712 2L 19037802..19037972 74..244 855 100 Plus
2L 23513712 2L 19035798..19035865 8..75 340 100 Plus
2L 23513712 2L 19038815..19038974 911..1063 240 89.5 Plus
Blast to na_te.dros performed on 2014-11-28 19:21:53 has no hits.

FMO01255.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:44:43 Download gff for FMO01255.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17492-RA 512..1623 1..1100 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:50 Download gff for FMO01255.5prime
Subject Subject Range Query Range Percent Splice Strand
mib2-RA 588..1699 1..1100 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:55:57 Download gff for FMO01255.5prime
Subject Subject Range Query Range Percent Splice Strand
mib2-RA 588..1699 1..1100 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:55:57 Download gff for FMO01255.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 19035791..19035865 1..75 96 -> Plus
2L 19037804..19037971 76..243 100 -> Plus
2L 19038085..19038754 244..911 99 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:50 Download gff for FMO01255.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19035791..19035865 1..75 96 -> Plus
arm_2L 19037804..19037971 76..243 100 -> Plus
arm_2L 19038085..19038754 244..911 99 -> Plus