FMO01264.5prime Sequence
1219 bp (243 high quality bases) assembled on 2008-03-12
> FMO01264.5prime
ATTAAACGAAGTTATCAATCCACATGCTGGCTGTGAGATTGGCCAATTTG
CCATGCGTTAAATGCCTTCTGGCGGCCAAATGCAATGCGACCTATGAGTA
CGAAGGCTGGTCGATTGTCCAGGAAGCGGTCTGCACCGGCGATGTGGACA
TACTGACGGCCATCATCGAAGTCCGGGATCTCCAGCGTCATGTCCAGCGG
GTTACGCATGTGCCTAAGCTGCTGCAGCACCTATTGGACGCACCAGATTT
CTACATCGAGATGAAGTGGGAATTCACCTCCTGGGTGCCTCTGATGTCGC
GTCTCTGTCCCACCGACACCTACAAGGTCTACAAACGGGGAGCCAACGTC
AGGATAGATACCACCCTGCTGGGCTTCGACAACAACACCTGGCAACGGGG
CAATCGCTCTTACATCTTCTAGGGGGCCAAAAAAACTGCCACGATGATCG
AGATCGATCACGATACAAACGAAGTAATGGTGGAGGAGATGAGCAGCGAT
ATCGGTGATATTGTGGCCATTCCACCAGCCTTGGGCACCGTGAGGGCGCG
CCTCAAGCCCCGGTGATCACGAACAACATCGAGATGGACAAAATTAGCTT
CGAGCGCAACAAGTGCGGCATATGGGGATGGCGTAGCGAGAAATCTGAGA
TGATCAACGGCTACAACTGCTAGGTGTATGGGGCCAGCAACGTGGAGTTT
GTTACAAACACGCGAATGGATCACCTTAGCGAGGAGCAAATTAAGAACAA
GACAGCGAGGACTCCACTGCATATCCTGCTGGGAATTGCTGATGAGGATT
ATGTGTCACCCGCTGATGCTGCTGCGGCACTAAAGATCGTACACCATCGT
CCCGGGTGGAGGAAGCTTCCAACGCTGGAGTTGAAATGGTGGCTGACACT
CACCAGTCCTGGAAATCAAAGCAACTGAAGCTCCGCAGGAGCGTCAGGAA
ACAGTACTCCAAAGTCTTCAGTACTCCGGAGAGTATTTACTCAAGAGTTT
GATCTTCACGGAGGATGCTGGCGGTCCTTAATCTGATTCCTAAGTGTGAC
GGCTTTAAAGCACTTAGGTAGCGAGGAATCCATTCATGAGGACGGTGCTT
CCCTCTGGATCTCATGTTCACAATGACGGTCACTGAGTTCTAACTGTAGT
GAGCTTGACATGCACGTCTGTCGGTGCGGACAAATGGCAATCTACCTCCT
AGGTTGTAAGTGTGCGGGT
FMO01264.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:16:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15118-RE | 2823 | CG15118-RE | 262..1274 | 24..1027 | 4505 | 96.8 | Plus |
CG15118-RD | 2345 | CG15118-RD | 79..1091 | 24..1027 | 4505 | 96.8 | Plus |
CG15118-RB | 2528 | CG15118-RB | 262..1274 | 24..1027 | 4505 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:16:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 19136323..19136637 | 429..115 | 1515 | 98.7 | Minus |
2R | 25286936 | 2R | 19135939..19136252 | 745..433 | 1475 | 98.7 | Minus |
2R | 25286936 | 2R | 19136695..19136785 | 114..24 | 455 | 100 | Minus |
2R | 25286936 | 2R | 19135432..19135625 | 1027..841 | 445 | 89.2 | Minus |
2R | 25286936 | 2R | 19135692..19135786 | 834..740 | 445 | 97.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:16:11 has no hits.
FMO01264.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:44:56 Download gff for
FMO01264.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15118-RC | 370..1371 | 20..1012 | 96 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:46:49 Download gff for
FMO01264.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15118-RB | 256..1257 | 20..1012 | 96 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:03:40 Download gff for
FMO01264.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15118-RB | 256..1257 | 20..1012 | 96 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:03:40 Download gff for
FMO01264.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 19135939..19136255 | 430..745 | 98 | <- | Minus |
2R | 19135685..19135780 | 746..840 | 97 | <- | Minus |
2R | 19136323..19136637 | 115..429 | 98 | <- | Minus |
2R | 19136695..19136791 | 20..114 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:46:49 Download gff for
FMO01264.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 15023190..15023285 | 746..840 | 97 | <- | Minus |
arm_2R | 15023444..15023760 | 430..745 | 98 | <- | Minus |
arm_2R | 15023828..15024142 | 115..429 | 98 | <- | Minus |
arm_2R | 15024200..15024296 | 20..114 | 97 | | Minus |