FMO01265.5prime Sequence
794 bp (794 high quality bases) assembled on 2008-03-12
> FMO01265.5prime
CAGTCGACATGGACTGGCTATTCGGCAAGAAGATCAGCCCCGATGAGATG
CTGCGTAAGAATCAGCGGGCGCTCAACAAAGCGATGCGAGATCTGGACCG
CGAGCGGATGAAAATGGAGCAGCAGGAGAAGAAGATTATCGCGGATATCA
AGAAGATGGCCAAGGAGGGTCAAATGGATGCCGTGAAGATCATGGCCAAG
GATCTGGTGCGCACGCGGCGGTATGCCAAGAAGTTCATGCTGATGAAGGC
AAACATCCAGGCGGTGTCCCTCAAAATTCAGACGCTCAAGTCGCAGAACA
CAATGGCACAGGCCATGAAAGGTGTCACGAAGGCCATGCAGAACATGAAC
CGCCAGCTGAATCTCCCGCAAATCCAGAAGATCCTGCAGGACTTCGAGAA
ACAGTCGGAAATGATGGACATGAAGGAGGAGATGATCAACGATGCCATCG
ATGACGCCATGGAGGACGAGGGCGACGAGGAGGAGACGGATGCTGTTGTG
TCCCAGGTGCTGGACGAACTGGGTCTGCAATTGGGCGAACAGCTGGGAGA
CCTTCCTTCCGCCTCCGGTTCCCTTTCCATAGCCGGCGGCGCTGGCGCTC
AGAAAGCACAGGCTGTGGCCGCTGGTGGCGTTGGCGGCGGTGGAGCCGCC
GGCGGAGGTGGAGCTAGTGGTGGCGGCGCTGGTGGTCCGGGAGCTCCCGG
TGGCAGTGGTGCCTCATCGCCCATGTCCGATGCCGATGCGGATCTTCACG
CGCGCCTGGATAAGCTGCGCAAGGATGCAAGCTTTCTAGACCAT
FMO01265.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:17:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vps2-RA | 1248 | CG14542-RA | 95..864 | 7..776 | 3835 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26053288..26053744 | 320..776 | 2270 | 99.8 | Plus |
| 3R | 32079331 | 3R | 26052915..26053231 | 7..323 | 1585 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:17:44 has no hits.
FMO01265.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:44:58 Download gff for
FMO01265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14542-RA | 85..865 | 1..782 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:38 Download gff for
FMO01265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| vps2-RA | 89..869 | 1..782 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:53:44 Download gff for
FMO01265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vps2-RA | 89..869 | 1..782 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:53:44 Download gff for
FMO01265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26052909..26053229 | 1..321 | 98 | -> | Plus |
| 3R | 26053290..26053742 | 322..774 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:38 Download gff for
FMO01265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21878631..21878951 | 1..321 | 98 | -> | Plus |
| arm_3R | 21879012..21879464 | 322..774 | 99 | -> | Plus |
