FMO01267.5prime Sequence
1193 bp (960 high quality bases) assembled on 2008-03-12
> FMO01267.5prime
AAAAACCAAGTTATCAGTCGACATGGGTGCCAATGTGTCGCACCTGGAGC
GGGAGATTGGCTCCGATCTGTTCCCACCGAATGAGCACTACTTCGGTCTG
GTGAACTTTGGGAACACCTGCTACAGCAACTCGGTGCTGCAGGCCCTCTA
CTTTTGCAAGCCATTCCGCGAGAAGGTCCTTGAGTACAAGGCCAAGAACA
AGAGGCCCAAGGAGACGCTGCTGTCGTGTCTGGCGGATCTGTTCTACAGC
ATTGCCACGCAGAAGAAGAAGGTGGGCTCGATTGCGCCCAAAAAGTTCAT
AACCAGGCTGCGAAAGGAGAAGGAGGAGTTCGATAACTATATGCAGCAGG
ATGCCCACGAGTTCCTCAACTTTCTGATCAATCACATCAATGAGATCATA
CTGGCCGAACGGAATGCAGGGCCCAGCAATGTTTTATCCCAAGGCCACCA
ATCAAGGCGGAAGCACAAGTGCCATGGCCAGCAGCATAGCTAGCAAGTCC
AGCTCAACGTCCAACTCGAATTCCAACTCCAATTCGACAACAAACTCAAA
TGGCAACAGTAGCAATTCGACGGGATCACTGAATGCCAACACAAGTGTGC
TGGATGCCAGTGGCAGTCTTACGGCCACCACAACACCTATAATCTCAGGA
AACGGAACGGGAACCAATGGGGCCAACTCGGAGCCCACCTGGGTGCACGA
GATCTTTCAGGGCATACTTACGTCCGAGACCAGGTGCCTCAACTGCGAGA
CGGTGAGCAGCAAGGACGAGAATTTCTTCGATCTCCAGGTGGACGTGGAC
CAGAACACCTCGATTACGCACTGCCTGCGGTGCTTCAGCAACACGGAGAC
CCTGTGCTCGGACACAGTTCAAGTGCGACATTGCTGCAGTTATCAGAGCG
CAGAAGAGATGCGTGTAAGAGTTGCCCATGATCCTGGCCCTGCATCTCAG
CGCTTCAGTACATGAGCAGTTATAGGCACATCAGTCTCGCATCGCGTTGT
GGTTTCCACTGACTGAGCCTCTTTAACACCTCGATGATGCATGATCTGAT
CGCCCTACGATTGACGCTGTGGTTATCCACTGCCGTCGACATTCTGGCAT
TATATATCCATGGAAGTCCGAACTGTGGCTCACATTCGCAGAGAATGGGG
ACATCCAGTTCCAATCAGGAACTCTATGGCTGGAACTCTGGAA
FMO01267.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:17:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Usp12-46-RB | 2208 | CG7023-RB | 787..1870 | 22..1083 | 4720 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:17:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22774953..22775978 | 22..1032 | 4280 | 97.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:17:10 has no hits.
FMO01267.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:45:01 Download gff for
FMO01267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7023-RB | 793..1921 | 19..1116 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:41:59 Download gff for
FMO01267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Usp12-46-RB | 793..1921 | 19..1116 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:04:07 Download gff for
FMO01267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Usp12-46-RB | 784..1912 | 19..1116 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:04:07 Download gff for
FMO01267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22774950..22776078 | 19..1116 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:41:59 Download gff for
FMO01267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18600672..18601800 | 19..1116 | 96 | | Plus |
