FMO01272.5prime Sequence
1127 bp (995 high quality bases) assembled on 2008-03-12
> FMO01272.5prime
ATAATACGAAGTTATCAGTCGACATGTCTCGGCATTTGGAAAACTTCTTT
ACCAACAGAGTACGGCGACAACTGCAAGTGGCTGAACAAATGACCACCGC
CGCCTCCACATCGCAGCATGCGACATCGTCCTCCACAATGATGGCGGGCT
CTGGATCCTTGGCGACCTCGTCGTCCGCCGCTGCCCCCACAACCACGCCC
AGCAGCTCGGCCGTTCGCGCCCTGGCCATGGAGTACAAGTCGCTGCAGGA
AGAGCCGGTGGAGGGATTCCGCGTCAAGCTGATCAACGACGACAATCTGT
TCGAATGGGAGGTGGCAATCTTCGGGCCACCGGACACCCTCTACCAGGGC
GGCTACTTCAAGGCGCACATGAAGTTCCCGCACGACTATCCATACTCACC
GCCATCCATACGCTTCCTGACGAAGGTCTGGCATCCGAATGTTTACGAGA
ACGGTGATCTGTGCATATCCATACTACATCCGCCGGTGGATGATCCGCAG
AGTGGCGAGCTGCCCTGCGAACGCTGGAATCCCACGCAGAATGTGCGCAC
CATCCTGCTGTCGGTCATATCGCTGCTCAATGAGCCGAACACATTCTCGC
CGGCCAACGTGGACGCCTCGGTCATGTACCGCCGATGGCGGGACTCACAG
GGTAAGGACAATGAGTATCCAAACATCATACGAAAACAGGCACTGGCCGC
CAATGCCGAGGCCAAGCGGGAGGGCATTGTGGTTCCGATGACCCTGGAGG
ACTACTGCCTGAAGCCCACGCGCAAGCCCACAACGGAGTCTGGCCTGGAT
GCCAACTTCTACGATGATGATTTCGATCTGGAGACGGAGGATGATCTGCC
ATCTGATGATGACTTCGATGAGACGACGACGATGATGAGGACGAGGATGA
GATGAGGACGTGCCACGGCGCCGATTAGCAAAAATAATGGAGGCAGCAGC
AGGTGCAAGGACAACGGGCTGGTCAGAAGAGGCGGCCGCCGCCGGAGCGG
ACGATGCCGAATCCGCCTGATGAACGCGGCAAGGGCGAGACCACAGCAAG
CTTTCTAAGACCATTTCGTTTGGGCGCGCCGGGCCCAGGTAAGTGGTCTA
ATCCTAAATCACTAAATCTCATAATCA
FMO01272.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:26:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7656-RD | 1410 | CG7656-RD | 234..1259 | 21..1045 | 4955 | 99.1 | Plus |
CG7656-RF | 2027 | CG7656-RF | 234..1253 | 21..1045 | 4855 | 98.5 | Plus |
CG7656-RE | 1234 | CG7656-RE | 118..1109 | 55..1045 | 4770 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:26:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15587004..15587634 | 651..21 | 3155 | 100 | Minus |
3L | 28110227 | 3L | 15586205..15586603 | 1045..648 | 1695 | 97.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:26:29 has no hits.
FMO01272.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:45:44 Download gff for
FMO01272.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7656-RC | 27..1060 | 14..1049 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:03:00 Download gff for
FMO01272.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7656-RD | 229..1262 | 14..1049 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:59:13 Download gff for
FMO01272.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7656-RD | 229..1262 | 14..1049 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:59:13 Download gff for
FMO01272.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15586202..15586600 | 651..1049 | 97 | <- | Minus |
3L | 15587005..15587631 | 24..650 | 100 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:03:00 Download gff for
FMO01272.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15579302..15579700 | 651..1049 | 97 | <- | Minus |
arm_3L | 15580105..15580731 | 24..650 | 100 | -> | Minus |