Clone FMO01277 Report

Search the DGRC for FMO01277

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:12
Well:77
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG10822-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO01277.5prime Sequence

383 bp (383 high quality bases) assembled on 2008-03-12

> FMO01277.5prime
ATTAAACGAAGTTATCAGTCGACATGCAGGAAGCAGAGACAGATCCAAAG
CGAACTAAAAGTTACGTGGAAGAAGTATTTCGCAAAGTGCAGGAGAAACC
CGGCGTGGAGGACATATTGATCATGAATCACTCGGGTGTGCCGGTGAAAA
CCTCGATGGATCGTCAGGAGGGCTTGCAGTACGCCTGTCTATATGACAAT
TTGCGGGAGAAGTGCCAGGCGTTCCTCTCCAAAATGGAGCCAGCCCAAAA
TTTGACTCTACTGAGAGTTCGTACCAAGTATCACGAGGTGCTCATTACAC
CAGATGCCAAGATCACCGTTTTGGTGGTTCAGAATGCCAAAGATACTTTT
CTTAACATAAAGGGTGCAAGCTTTCTAGACCAT

FMO01277.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:28:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG10822-RA 554 CG10822-RA 111..452 24..365 1710 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:28:56
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19951528..19951848 45..365 1605 100 Plus
Blast to na_te.dros performed on 2014-11-28 21:28:57 has no hits.

FMO01277.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:43:28 Download gff for FMO01277.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10822-RA 1..345 24..366 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:34:16 Download gff for FMO01277.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10822-RA 104..459 17..374 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:24:05 Download gff for FMO01277.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10822-RA 104..459 17..374 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:24:05 Download gff for FMO01277.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 19951528..19951855 45..374 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:34:16 Download gff for FMO01277.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15839033..15839360 45..374 98   Plus